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PXD014519

PXD014519 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleMetaproteomic data of maize rhizosphere
DescriptionWe present metaproteome data from maize rhizosphere from sodic soil. Isolation of proteome from maize rhizosphere collected from Experimental Farm, ICAR-IISS, Mau, India was done with the standardized protocol at our laboratory and metaproteome analysis was done with the standardized pipepline. In total 696 proteins with different functions representing 245 genus and 395 species were identified. The proteome data provides direct evidence on the biological processes in soil ecosystem and is the first reported reference data from maize rhizosphere.
HostingRepositoryPRIDE
AnnounceDate2019-10-08
AnnouncementXMLSubmission_2019-10-08_05:33:49.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterRenu S
SpeciesList scientific name: rhizosphere soil bacteria ensemble; NCBI TaxID: 150475;
ModificationListmonohydroxylated residue; iodoacetamide derivatized residue
InstrumentSynapt MS
Dataset History
RevisionDatetimeStatusChangeLog Entry
02019-07-08 06:11:06ID requested
12019-10-08 05:33:50announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: LC MSMS, Metaproteome, Maize rhizosphere, soil microbial proteins, Microbiota
Contact List
Dr Renu
contact affiliationICAR- National Bureau of Agriculturally Important Microorganisms, Kushmaur, Maunath Bhanjan, Mau, Uttar Pradesh, INDIA
contact emailrenuiari@rediffmail.com
lab head
Renu S
contact affiliationICAR-NBAIM
contact emailrenuiari@rediffmail.com
dataset submitter
Full Dataset Link List
Dataset FTP location
PRIDE project URI
Repository Record List
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