PXD013944

PXD013944 is an original dataset announced via ProteomeXchange.

Title	: Integration of genomic, transcriptomic and proteomic insights into evolved dependence of deep-sea tubeworm holobiont
Description	The first integrated genomic, transcriptomic and proteomic analysis of this methane-seep tubeworm decipher the interdependency between the host and symbionts, with an aim to reveal the molecular mechanisms enabling this worm to survive and thrive in chemosynthetic habitats.
HostingRepository	PRIDE
AnnounceDate	2019-10-14
AnnouncementXML	Submission_2019-10-14_00:51:42.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yi YANG
SpeciesList	scientific name: Paraescarpia cf. echinospica; NCBI TaxID: 204274;
ModificationList	iodoacetamide derivatized residue
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2019-05-20 09:09:02	ID requested
1	2019-08-28 00:31:26	announced
⏵ 2	2019-10-14 00:51:44	announced	2019-10-14: Updated publication reference for PubMed record(s): 31595051.

Yang Y, Sun J, Sun Y, Kwan YH, Wong WC, Zhang Y, Xu T, Feng D, Zhang Y, Qiu JW, Qian PY, Genomic, transcriptomic, and proteomic insights into the symbiosis of deep-sea tubeworm holobionts. ISME J, 14(1):135-150(2020) [pubmed]

submitter keyword: deep sea, chemosynthesis, symbiosis, holobiont

Pei-Yuan QIAN
contact affiliation	Ocean Science Department, Hkust
contact email	boqianpy@ust.hk
lab head
Yi YANG
contact affiliation	HKUST
contact email	peggy.yangyi@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/08/PXD013944

PRIDE project URI

• PRIDE
  1. PXD013944
     1. Label: PRIDE project
     2. Name: : Integration of genomic, transcriptomic and proteomic insights into evolved dependence of deep-sea tubeworm holobiont