PXD013818

PXD013818 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Apostichopus japonicus circumoral nerve ring LC-MS/MS
Description	The objective of this study was to perform a detailed analysis of neuropeptides in A. japonicus by sequencing the transcriptome of neural tissue (circumoral nerve ring; CNR) and combining analysis of these sequence data with mass spectroscopic analysis of CNR extracts so that the structure of mature neuropeptides could be determined. Collectively, these data provide an important molecular basis for investigation of the physiological roles of neuropeptides in A. japonicus and other sea cucumber species.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:49:06.350.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yingqiu Zheng
SpeciesList	scientific name: Stichopus japonicus (Sea cucumber); NCBI TaxID: 307972;
ModificationList	(R)-5-oxo-1; amidated residue; monohydroxylated residue; acetylated residue; deamidated residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-05-13 06:41:11	ID requested
1	2019-06-25 01:17:03	announced
⏵ 2	2024-10-22 04:49:14	announced	2024-10-22: Updated project metadata.

Publication List

10.1038/s41598-019-45271-3;
Chen M, Talarovicova A, Zheng Y, Storey KB, Elphick MR, Neuropeptide precursors and neuropeptides in the sea cucumber Apostichopus japonicus: a genomic, transcriptomic and proteomic analysis. Sci Rep, 9(1):8829(2019) [pubmed]

10.1038/s41598-019-45271-3;

Chen M, Talarovicova A, Zheng Y, Storey KB, Elphick MR, Neuropeptide precursors and neuropeptides in the sea cucumber Apostichopus japonicus: a genomic, transcriptomic and proteomic analysis. Sci Rep, 9(1):8829(2019) [pubmed]

Keyword List

submitter keyword: circumoral nerve ring,LC-MS/MS,Apostichopus japonicus

submitter keyword: circumoral nerve ring,LC-MS/MS,Apostichopus japonicus

Contact List

Chen Muyan
contact affiliation	The Key Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao, PR China
contact email	chenmuyan@ouc.edu.cn
lab head
Yingqiu Zheng
contact affiliation	ocean university of China
contact email	yingqiuz@163.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/06/PXD013818
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/06/PXD013818

PRIDE project URI

Repository Record List

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