PXD013774

PXD013774 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Protocol for performing and analyzing TPP-TR and TPP-CCR experiments
Description	Explore the effect of Panobinostat on the thermal stability of the proteins of the K562 cell line proteome.
HostingRepository	PRIDE
AnnounceDate	2019-05-25
AnnouncementXML	Submission_2019-05-25_00:30:22.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Maria Faelth Savitski
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue; methionine oxidation with neutral loss of 64 Da; acetylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-05-08 07:02:09	ID requested
1	2019-05-10 00:26:35	announced
2	2019-05-10 02:53:37	announced	Updated project metadata.
⏵ 3	2019-05-25 00:30:24	announced	Updated project metadata.

Publication List

Franken H, Mathieson T, Childs D, Sweetman GM, Werner T, T, ö, gel I, Doce C, Gade S, Bantscheff M, Drewes G, Reinhard FB, Huber W, Savitski MM, Thermal proteome profiling for unbiased identification of direct and indirect drug targets using multiplexed quantitative mass spectrometry. Nat Protoc, 10(10):1567-93(2015) [pubmed]

Franken H, Mathieson T, Childs D, Sweetman GM, Werner T, T, ö, gel I, Doce C, Gade S, Bantscheff M, Drewes G, Reinhard FB, Huber W, Savitski MM, Thermal proteome profiling for unbiased identification of direct and indirect drug targets using multiplexed quantitative mass spectrometry. Nat Protoc, 10(10):1567-93(2015) [pubmed]

Keyword List

curator keyword: Biological, Biomedical
submitter keyword: TPP-TR, TPP-CCR, Panobinostat

curator keyword: Biological, Biomedical

submitter keyword: TPP-TR, TPP-CCR, Panobinostat

Contact List

Marcus Bantscheff
contact affiliation	Cellzome
contact email	marcus.x.bantscheff@gsk.com
lab head
Maria Faelth Savitski
contact affiliation	Cellzome
contact email	maria.x.faelth-savitski@gsk.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/05/PXD013774
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/05/PXD013774

PRIDE project URI

Repository Record List

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