PXD013743

PXD013743 is an original dataset announced via ProteomeXchange.

Title	Colorectal cancer anti-ORF1p LFQ IP-MS
Description	Here, three colorectal tumors were subjected to anti-ORF1p LFQ, IP-MS: (A) Krukenberg Carcinoma, Ovary; (B) Metastatic Rectal Adenocarcinoma, Liver; (C) Adenocarcinoma, Colon. These were accompanied by matched normal IP controls and/or mouse IgG IP controls. The objective is to map LINE-1 RNP interactions in cancer.
HostingRepository	PRIDE
AnnounceDate	2019-08-23
AnnouncementXML	Submission_2019-08-23_06:50:10.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	John LaCava
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	phosphorylated residue; acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2019-05-07 03:45:29	ID requested
⏵ 1	2019-08-23 06:50:11	announced

Dataset with its publication pending

submitter keyword: LINE-1, L1, CRC, LC-MSMS, patient tumor, retrotransposon

John LaCava
contact affiliation	The Rockefeller University
contact email	jlacava@rockefeller.edu
lab head
John LaCava
contact affiliation	The Rockefeller University
contact email	lacava@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/08/PXD013743

PRIDE project URI

• PRIDE
  1. PXD013743
     1. Label: PRIDE project
     2. Name: Colorectal cancer anti-ORF1p LFQ IP-MS