PXD013623

PXD013623 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	The metabolic response of Pseudomonas taiwanensis to NADH dehydrogenase deficiency
Description	We investigated the essentiality of the three NADH dehydrogenases of the respiratory chain of the obligate aerobe Pseudomonas taiwanensis VLB120 and the impact of the knockouts of corresponding genes on its physiology and metabolism.
HostingRepository	PRIDE
AnnounceDate	2020-04-08
AnnouncementXML	Submission_2020-04-07_23:41:33.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD013623
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Christopher Petzold
SpeciesList	scientific name: Pseudomonas taiwanensis; NCBI TaxID: 470150;
ModificationList	Ammonia-loss; Deamidated; Dehydrated; Oxidation; Acetyl; Carbamidomethyl
Instrument	6550 iFunnel Q-TOF LC/MS

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-04-24 08:31:33	ID requested
⏵ 1	2020-04-07 23:41:34	announced

Publication List

Nies SC, Dinger R, Chen Y, Wordofa GG, Kristensen M, Schneider K, B, ü, chs J, Petzold CJ, Keasling JD, Blank LM, Ebert BE, Systems Analysis of NADH Dehydrogenase Mutants Reveals Flexibility and Limits of Pseudomonas taiwanensis VLB120's Metabolism. Appl Environ Microbiol, 86(11):(2020) [pubmed]

Nies SC, Dinger R, Chen Y, Wordofa GG, Kristensen M, Schneider K, B, ü, chs J, Petzold CJ, Keasling JD, Blank LM, Ebert BE, Systems Analysis of NADH Dehydrogenase Mutants Reveals Flexibility and Limits of Pseudomonas taiwanensis VLB120's Metabolism. Appl Environ Microbiol, 86(11):(2020) [pubmed]

Keyword List

submitter keyword: Pseudomonas
NADH dehydrogenase
respiratory activity
oxidative stress
electron transport chain

submitter keyword: Pseudomonas

NADH dehydrogenase

respiratory activity

oxidative stress

electron transport chain

Contact List

Christopher Petzold
contact affiliation	Biological Systems & Engineering Division Lawrence Berkeley National Laboratory
contact email	cjpetzold@lbl.gov
lab head
Christopher Petzold
contact affiliation	Lawrence Berkeley National Laboratory
contact email	cjpetzold@lbl.gov
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/04/PXD013623
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/04/PXD013623

PRIDE project URI

Repository Record List

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