PXD013581

PXD013581 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Mass Spectrometry-compatible Subcellular Fractionation
Description	We developed a mass spectrometry-compatible subcellular fractionation protocol. This method involves separating cells into cytoplasmic, organellar, and nuclear fractions without ultracentrifugation.
HostingRepository	jPOST
AnnounceDate	2019-11-15
AnnouncementXML	Submission_2022-09-18_03:24:49.953.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Takeshi Masuda
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	S-carboxamidomethyl-L-cysteine; Label:13C(6)15N(4); unknown modification; L-methionine sulfoxide; O-phospho-L-serine; O-phospho-L-threonine; O4'-phospho-L-tyrosine
Instrument	LTQ Orbitrap

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-04-21 07:03:06	ID requested
1	2019-11-14 07:01:56	announced
2	2021-02-04 16:46:38	announced	2021-02-04: Updated FTP location.
⏵ 3	2022-09-18 03:24:50	announced	2022-09-18: Updated FTP location.

Publication List

Masuda T, Sugiyama N, Tomita M, Ohtsuki S, Ishihama Y, Mass Spectrometry-Compatible Subcellular Fractionation for Proteomics. J Proteome Res, 19(1):75-84(2020) [pubmed]

Masuda T, Sugiyama N, Tomita M, Ohtsuki S, Ishihama Y, Mass Spectrometry-Compatible Subcellular Fractionation for Proteomics. J Proteome Res, 19(1):75-84(2020) [pubmed]

Keyword List

submitter keyword: Subcellular fractionation

submitter keyword: Subcellular fractionation

Contact List

Yasushi Ishihama
lab head
Takeshi Masuda
contact affiliation	Kumamoto University
dataset submitter

Full Dataset Link List

jPOST dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST000589/

jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST000589/