PXD013449

PXD013449 is an original dataset announced via ProteomeXchange.

Title	Cerebrospinal fluid 20 μg protein digest mixed-mode fractionation 11 fractions
Description	A CSF fractionation experiment was conducted, where trypsin digested 20 µg un-depleted CSF peptides were separated into eleven fractions and analysed using an QExactive HF, resulting in 1194 identified proteins.
HostingRepository	PRIDE
AnnounceDate	2024-10-07
AnnouncementXML	Submission_2024-10-07_13:29:53.913.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD013449
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Astrid Guldbrandsen
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	Ammonia-loss; Gln->pyro-Glu; Glu->pyro-Glu; Oxidation; Carbamidomethyl; Acetyl
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2019-04-10 08:43:26	ID requested
⏵ 1	2024-10-07 13:29:59	announced

10.1186/s12014-020-09296-5;

Guldbrandsen A, Lereim RR, Jacobsen M, Garberg H, Kroksveen AC, Barsnes H, Berven FS, Development of robust targeted proteomics assays for cerebrospinal fluid biomarkers in multiple sclerosis. Clin Proteomics, 17():33(2020) [pubmed]

submitter keyword: cerebrospinal fluid,human

Frode S. Berven
contact affiliation	Proteomics unit (PROBE), The Department of Biomedicine, University of Bergen, Norway
contact email	Frode.Berven@biomed.uib.no
lab head
Astrid Guldbrandsen
contact affiliation	PROBE
contact email	astrid.guldbrandsen@biomed.uib.no
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/09/PXD013449

PRIDE project URI

• PRIDE
  1. PXD013449
     1. Label: PRIDE project
     2. Name: Cerebrospinal fluid 20 μg protein digest mixed-mode fractionation 11 fractions