PXD013382

PXD013382 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Arabidopsis CEP5 overexprssion line LC-MSMS
Description	While CEP5 has been shown to play a role in shoot and root growth, possibly through interaction with the CEPR1/XIP1 and/or CEPR2 receptor kinase, very little is known about the downstream molecular effects. To gain insight in the changes downstream of CEP5, we quantified differences in proteomes of wild type and CEP5OE shoots using label-free mass spectrometry-based proteomics
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:03:41.019.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Shanshuo Zhu
SpeciesList	scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-04-05 06:12:29	ID requested
1	2020-05-14 23:50:08	announced
⏵ 2	2024-10-22 05:03:48	announced	2024-10-22: Updated project metadata.

Publication List

Smith S, Zhu S, Joos L, Roberts I, Nikonorova N, Vu LD, Stes E, Cho H, Larrieu A, Xuan W, Goodall B, van de Cotte B, Waite JM, Rigal A, Ramans Harborough S, Persiau G, Vanneste S, Kirschner GK, Vandermarliere E, Martens L, Stahl Y, Audenaert D, Friml J, Felix G, Simon R, Bennett MJ, Bishopp A, De Jaeger G, Ljung K, Kepinski S, Robert S, Nemhauser J, Hwang I, Gevaert K, Beeckman T, De Smet I, . Mol Cell Proteomics, 19(8):1248-1262(2020) [pubmed]
10.1074/mcp.ra119.001826;

Smith S, Zhu S, Joos L, Roberts I, Nikonorova N, Vu LD, Stes E, Cho H, Larrieu A, Xuan W, Goodall B, van de Cotte B, Waite JM, Rigal A, Ramans Harborough S, Persiau G, Vanneste S, Kirschner GK, Vandermarliere E, Martens L, Stahl Y, Audenaert D, Friml J, Felix G, Simon R, Bennett MJ, Bishopp A, De Jaeger G, Ljung K, Kepinski S, Robert S, Nemhauser J, Hwang I, Gevaert K, Beeckman T, De Smet I, . Mol Cell Proteomics, 19(8):1248-1262(2020) [pubmed]

10.1074/mcp.ra119.001826;

Keyword List

submitter keyword: Arabidopsis, shoot, LC-MS/MS

submitter keyword: Arabidopsis, shoot, LC-MS/MS

Contact List

Shanshuo Zhu
contact affiliation	VIB Ceter for Plant System Biology and Medical Biotechnology; Ugent Department of Plant Biotechnology and Bioinformatics;Ugent Department of Biomolecular Medicine. Ghent, Belgium
contact email	shzhu@psb.vib-ugent.be
lab head
Shanshuo Zhu
contact affiliation	VIB-Ugent center for Plant systems biology
contact email	shzhu@psb.vib-ugent.be
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/05/PXD013382
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/05/PXD013382

PRIDE project URI

Repository Record List

[ + ]