PXD013301

PXD013301 is an original dataset announced via ProteomeXchange.

Title	Proteome of HDL from non-diabetic hemodialysis patients
Description	Chronic kidney disease is associated with an increased cardiovascular morbidity/mortality and the altered biological properties of HDL particles have been pointed out in this burden. We aimed to describe the proteome of HDL from non-diabetic hemodialysis patients and proteins which were up and down represented in HDL particles of HD patients compared to heathy controls. HDL were sampled from the plasma of 9 non-diabetic HD and 9 potential kidney-donors patients with a sequential potassium bromide stepwise density gradient ultracentrifugation. Samples were analyzed using an nano-RSLC coupled on line with a Q-Orbitrap.
HostingRepository	PRIDE
AnnounceDate	2020-05-26
AnnouncementXML	Submission_2020-05-26_14:26:17.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD013301
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Frederic DELOLME
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	HNE; Nitro; Guanidinyl; Met-loss; Carboxymethyl; Nitrosyl; Met-loss+Acetyl; Oxidation; Carbamyl; Acetyl; Carbamidomethyl; Chlorination
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2019-03-29 04:52:12	ID requested
⏵ 1	2020-05-26 14:26:18	announced

Florens N, Calzada C, Delolme F, Page A, Guebre Egziabher F, Juillard L, Soulage ACO, Proteomic Characterization of High-Density Lipoprotein Particles from Non-Diabetic Hemodialysis Patients. Toxins (Basel), 11(11):(2019) [pubmed]

submitter keyword: HDL hemodialysis LFQ-nanoLC-MSMS

Frederic DELOLME /Nans Florens
contact affiliation	Protein Science Facility, SFR BioSciences CNRS UMS3444, Inserm US8, UCBL, ENS de Lyon, 50 Avenue Tony Garnier, 69007Lyon, France.
contact email	frederic.delolme@ibcp.fr
lab head
Frederic DELOLME
contact affiliation	CNRS UMS3444 Protein Science Facility
contact email	frederic.delolme@ibcp.fr
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/05/PXD013301

PRIDE project URI

• PRIDE
  1. PXD013301
     1. Label: PRIDE project
     2. Name: Proteome of HDL from non-diabetic hemodialysis patients