PXD013009

PXD013009 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Quantitative proteomic analysis of differentially expressed proteins in tubers of potato plants differing in resistance to Dickeya solani
Description	To identify differently expressed proteins in tuber tissue of potato cultivars and diploid interspecific hybrids of Solanum, differing in resistance to Dickeya solani, comparative analysis was performed. Two highly resistant (Bea and Humalda) and three susceptible (Irys, Katahdin, Ulster Supreme) potato cultivars, as well as the highly resistant (DG 00-270) and the susceptible (DG 08-305) diploid clones, were studied. DG 00-270 exhibited higher resistance to D. solani than the cultivars Bea and Humalda. Proteins were extracted from wounded potato tubers inoculated with bacteria at an early symptomatic phase and from controls, i.e., intact tubers and wounded mock-inoculated tubers. Protein profiles were analyzed using nano-liquid chromatography coupled with tandem mass spectrometry (LC-MS-MS/MS).
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_06:56:27.141.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD013009
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Michał Kistowski
SpeciesList	scientific name: Solanum tuberosum (Potato); NCBI TaxID: 4113;
ModificationList	Methylthio; Oxidation; Carbamidomethyl
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-03-07 06:46:30	ID requested
1	2019-05-21 08:13:51	announced
2	2019-06-14 02:44:13	announced	Updated publication reference for DOI(s): 10.1007/s11104-019-04125-7.
⏵ 3	2023-11-14 06:56:27	announced	2023-11-14: Updated project metadata.

Publication List

10.6019/PXD013009;

10.6019/PXD013009;

Keyword List

curator keyword: Biological
submitter keyword: protein expression, resistance,potato tubers, Dickeya solani

curator keyword: Biological

submitter keyword: protein expression, resistance,potato tubers, Dickeya solani

Contact List

Michał Dadlez
contact affiliation	Mass Spectrometry Laboratory, Institute of Biochemistry and Biophysics PAS
contact email	michald@ibb.waw.pl
lab head
Michał Kistowski
contact affiliation	Institute of Biochemistry and Biophysics PAS
contact email	mkisto@gmail.com
dataset submitter

Full Dataset Link List

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PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/05/PXD013009

PRIDE project URI

Repository Record List

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