PXD012927

PXD012927 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	HULC interactome MS analysis .
Description	we report a high throughput strategy to screen for lncRNA interacting proteins in vivo by combining tobramycin affinity purification and mass spectrometric analysis (TOBAP-MS). This method was applied to establish the interactome network for the lncRNA highly-upregulated in liver cancer (HULC).
HostingRepository	PRIDE
AnnounceDate	2024-10-07
AnnouncementXML	Submission_2024-10-07_10:24:31.057.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Hao Wang
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	6x(13)C labeled residue
Instrument	LTQ Orbitrap Elite

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-03-01 02:58:27	ID requested
⏵ 1	2024-10-07 10:24:31	announced

Publication List

Wang C, Li Y, Yan S, Wang H, Shao X, Xiao M, Yang B, Qin G, Kong R, Chen R, Zhang N, Interactome analysis reveals that lncRNA HULC promotes aerobic glycolysis through LDHA and PKM2. Nat Commun, 11(1):3162(2020) [pubmed]
10.1038/s41467-020-16966-3;

Wang C, Li Y, Yan S, Wang H, Shao X, Xiao M, Yang B, Qin G, Kong R, Chen R, Zhang N, Interactome analysis reveals that lncRNA HULC promotes aerobic glycolysis through LDHA and PKM2. Nat Commun, 11(1):3162(2020) [pubmed]

10.1038/s41467-020-16966-3;

Keyword List

submitter keyword: HULC, SILAC, Gel-based proteomics

submitter keyword: HULC, SILAC, Gel-based proteomics

Contact List

Ruibing Chen
contact affiliation	Department of Genetics, school of Basic Medical Sciences, Tianjin Medical University, Tianjin 300070, P.R. China
contact email	chenruibing@tmu.edu.cn
lab head
Hao Wang
contact affiliation	Tianjin medical university
contact email	137737756@qq.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/07/PXD012927
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/07/PXD012927

PRIDE project URI

Repository Record List

[ + ]