PXD012877

PXD012877 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Modeling protein destiny in developing tomato fruit
Description	Proteomics and transcriptomics data of tomato fruits at 9 developmental stages were used to calculate with a mathematical model the rate constants of synthesis and degradation for over 1,000 proteins.
HostingRepository	PRIDE
AnnounceDate	2019-11-06
AnnouncementXML	Submission_2019-11-06_00:33:18.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Mélisande Blein-Nicolas
SpeciesList	scientific name: Solanum lycopersicum; NCBI TaxID: 4081;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-02-26 01:44:17	ID requested
1	2019-05-06 07:02:58	announced
⏵ 2	2019-11-06 00:33:33	announced	2019-11-06: Updated publication reference for PubMed record(s): 31681351, 31015299.

Publication List

Belouah I, Nazaret C, P, é, triacq P, Prigent S, B, é, nard C, Mengin V, Blein-Nicolas M, Denton AK, Balliau T, Aug, é S, Bouchez O, Mazat JP, Stitt M, Usadel B, Zivy M, Beauvoit B, Gibon Y, Colombi, é S, Modeling Protein Destiny in Developing Fruit. Plant Physiol, 180(3):1709-1724(2019) [pubmed]
Decros G, Beauvoit B, Colombi, é S, Cabasson C, Bernillon S, Arrivault S, Guenther M, Belouah I, Prigent S, Baldet P, Gibon Y, P, é, triacq P, Regulation of Pyridine Nucleotide Metabolism During Tomato Fruit Development Through Transcript and Protein Profiling. Front Plant Sci, 10():1201(2019) [pubmed]

Belouah I, Nazaret C, P, é, triacq P, Prigent S, B, é, nard C, Mengin V, Blein-Nicolas M, Denton AK, Balliau T, Aug, é S, Bouchez O, Mazat JP, Stitt M, Usadel B, Zivy M, Beauvoit B, Gibon Y, Colombi, é S, Modeling Protein Destiny in Developing Fruit. Plant Physiol, 180(3):1709-1724(2019) [pubmed]

Decros G, Beauvoit B, Colombi, é S, Cabasson C, Bernillon S, Arrivault S, Guenther M, Belouah I, Prigent S, Baldet P, Gibon Y, P, é, triacq P, Regulation of Pyridine Nucleotide Metabolism During Tomato Fruit Development Through Transcript and Protein Profiling. Front Plant Sci, 10():1201(2019) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: protein turnover, systems biology, LC-MS/MS, transcriptome

curator keyword: Biological

submitter keyword: protein turnover, systems biology, LC-MS/MS, transcriptome

Contact List

Sophie Colombié
contact affiliation	UMR 1332 BFP, INRA, Univ Bordeaux, F33883 Villenave d’Ornon, France
contact email	sophie.colombie@inra.fr
lab head
Mélisande Blein-Nicolas
contact affiliation	Génétique Quantitative et Évolution – Le Moulon INRA – Université Paris-Sud – CNRS – AgroParisTech Ferme du Moulon 91190 Gif-sur-Yvette France
contact email	melisande.blein-nicolas@inra.fr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/05/PXD012877
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/05/PXD012877

PRIDE project URI

Repository Record List

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