PXD012667 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Oxidative Stress Biomarker of Type 2 Diabetes Mellitus |
Description | In this project, using discovery-based mass spectrometry approach and adopting data-dependent LC-MS/MS, we detected and identified modified peptides in complex clinical plasma samples and developed first-level biomarker verification strategy. Further, using liquid chromatography-multiple reaction monitoring mass spectrometry (LC-MRM-MS) based targeted approach which virtually quantifies irreversible oxidation at any targeted cysteine, we quantified cysteine tri-oxidation in HSA in diabetes patients. Site-specific tri-oxidized HSA could be a potential biomarker of diabetes and provide directive of disease mechanism. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_05:05:07.624.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Sunil Adav |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | monohydroxylated residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-02-12 01:56:07 | ID requested | |
1 | 2020-05-26 13:20:30 | announced | |
⏵ 2 | 2024-10-22 05:05:15 | announced | 2024-10-22: Updated project metadata. |
Publication List
10.1038/s41598-020-62341-z; |
Paramasivan S, Adav SS, Ngan SC, Dalan R, Leow MK, Ho HH, Sze SK, Serum albumin cysteine trioxidation is a potential oxidative stress biomarker of type 2 diabetes mellitus. Sci Rep, 10(1):6475(2020) [pubmed] |
Keyword List
curator keyword: Biomedical |
submitter keyword: Human Plasma |
Contact List
Prof Sze S K |
contact affiliation | Nanyang Technological University |
contact email | sksze@ntu.edu.sg |
lab head | |
Sunil Adav |
contact affiliation | Nanyang Technological University |
contact email | ssadav@ntu.edu.sg |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/05/PXD012667 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD012667
- Label: PRIDE project
- Name: Oxidative Stress Biomarker of Type 2 Diabetes Mellitus