PXD012661

PXD012661 is an original dataset announced via ProteomeXchange.

Title	RNA-bound proteome of Mycobacterium bovis
Description	The dataset accompanying a publication describing the RNA degradosome components in Mycobacterium tuberculosis (Mtb). The RNA-bound proteome was determined by affinity purification of protein-RNA complexes from Mycobacterium bovis cells fed with 4-thiouridine and crosslinked via photoactivation at 365nm. Affinity purified RNA-protein complexes were subjected to LC-MS analysis
HostingRepository	PRIDE
AnnounceDate	2019-04-01
AnnouncementXML	Submission_2019-04-12_01:39:30.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Przemyslaw Plocinski
SpeciesList	scientific name: Mycobacterium bovis; NCBI TaxID: 1765;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2019-02-11 01:50:24	ID requested
1	2019-04-01 00:36:05	announced
⏵ 2	2019-04-12 01:39:31	announced	Updated publication reference for PubMed record(s): 30957850.

P, ł, oci, ń, ski P, Macios M, Houghton J, Niemiec E, P, ł, oci, ń, ska R, Brzostek A, S, ł, omka M, Dziadek J, Young D, Dziembowski A, Proteomic and transcriptomic experiments reveal an essential role of RNA degradosome complexes in shaping the transcriptome of Mycobacterium tuberculosis. Nucleic Acids Res, 47(11):5892-5905(2019) [pubmed]

curator keyword: Biomedical

submitter keyword: tuberculosis, RNA bound proteome, RNA degradosome

Andrzej Dziembowski
contact affiliation	Institute of Biochemistry and Biophysics, Polish Academy of Sciences
contact email	andrzej.dziembowski.ibb@gmail.com
lab head
Przemyslaw Plocinski
contact affiliation	Institute of Medical Biology of the Polish Academy of Sciences
contact email	przemyslaw.plocinski@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/04/PXD012661

PRIDE project URI

• PRIDE
  1. PXD012661
     1. Label: PRIDE project
     2. Name: RNA-bound proteome of Mycobacterium bovis