PXD012599

PXD012599 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Three-pronged 'Pitchfork' strategy enables an extensive description of human membrane proteome and identification of missing proteins
Description	In this study, we combined the transmembrane segment-oriented method hpTC with a solid phase enrichment of glycopeptides (SPEG) and standard 'detergent and trypsin' approach into a three-pronged 'Pitchfork' strategy to maximize membrane proteome coverage. The strategy enabled identification of over 1200 IMPs in human lymphoma cells.
HostingRepository	MassIVE
AnnounceDate	2019-02-05
AnnouncementXML	Submission_2019-02-05_05:53:58.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Ondrej Vit
SpeciesList	scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606;
ModificationList	Met->Hse; Met->Hsl; Deamidated; CarbamidomethylDTT; Homocysteic_acid
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-02-05 05:02:33	ID requested
⏵ 1	2019-02-05 05:53:59	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: integral membrane proteins, cyanogen bromide, glycopeptide enrichment, missing proteins, mantle cell lymphoma

submitter keyword: integral membrane proteins, cyanogen bromide, glycopeptide enrichment, missing proteins, mantle cell lymphoma

Contact List

Ondrej Vit
contact affiliation	Charles University, First Faculty of Medicine
contact email	ondrej.vit@lf1.cuni.cz
lab head
Ondrej Vit
contact affiliation	First Facutly of Medicine, Charles University
contact email	ondrej.vit@lf1.cuni.cz
dataset submitter

Full Dataset Link List

MassIVE dataset URI
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MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000083404