PXD012590 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Profiling proteins regulated by putative methyltransferases in Xanthomonas axonopodis pv. glycines str. 8ra |
Description | - Identification of proteins whose expression was affected by three putative methyltransferases in Xanthomonas axonopodis pv. glycines str. 8ra - Shotgun proteomic analysis was used - Four strains were used with three biological replicates (total 12 samples). One is the wildtype carrying an empty vector and three are the wildtype is overexpressing AOY63480 (XAR_0638), AOY64271 (XAR_2195: XgMT2), or AOY60995 (XAR_3653: XgMT3). AOY63480, AOY64271, and AOY60995 are putative methyltransferases. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:52:53.445.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Sang-Wook Han |
SpeciesList | scientific name: Xanthomonas axonopodis pv. glycines str. 8ra; NCBI TaxID: 1401257; |
ModificationList | iodoacetamide derivatized residue |
Instrument | LTQ |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-02-01 05:54:39 | ID requested | |
1 | 2019-11-11 02:54:53 | announced | |
⏵ 2 | 2024-10-22 04:52:56 | announced | 2024-10-22: Updated project metadata. |
Publication List
Park HJ, Lee J, Kim M, Han SW, Profiling Differentially Abundant Proteins by Overexpression of Three Putative Methyltransferases in Xanthomonas axonopodis pv. glycines. Proteomics, 20(1):e1900125(2020) [pubmed] |
10.1002/pmic.201900125; |
Keyword List
submitter keyword: Xanthomonas axonopodis pv. glycines, label-free shotgun proteomics, methyltransferase |
Contact List
Sang-Wook Han |
contact affiliation | Department of Plant Science and Technology, Chung-Ang University, Republic of Korea |
contact email | swhan@cau.ac.kr |
lab head | |
Sang-Wook Han |
contact affiliation | Chung-Ang University |
contact email | swhan@cau.ac.kr |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD012590
- Label: PRIDE project
- Name: Profiling proteins regulated by putative methyltransferases in Xanthomonas axonopodis pv. glycines str. 8ra