PXD012528

PXD012528 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Targeted Mass Spectrometry Analysis of Clostridium perfringens Toxins
Description	Clostridium perfringens is an anaerobic, gram-positive, spore-forming bacterium spread throughout the environment. This bacterium is a common agent in the gastrointestinal tracts of healthy human beings and other mammals. Simultaneously, this agent is one of the most significant producers of toxins among all known bacteria. This expressive toxicity is due to the bacterium’s ability collectively to produce different protein toxins and/or enzymes with diverse modes of action. The present study uses currently developed targeted proteomic methods for the simultaneous detection of selected C. perfringens protein toxins. The method was applied in different kinds of environmental matrices and was used to analyze toxins production in a set of collection strains.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:52:40.774.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Miloslava Ďuráčová
SpeciesList	scientific name: Clostridium perfringens; NCBI TaxID: 1502; scientific name: Clostridium perfringens; NCBI TaxID: NCBITaxon:1502;
ModificationList	6x(13)C; 6x(13)C; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-01-28 01:48:15	ID requested
1	2019-03-25 09:24:51	announced
2	2019-03-28 13:47:36	announced	Updated publication reference for PubMed record(s): 30909561.
⏵ 3	2024-10-22 04:52:44	announced	2024-10-22: Updated project metadata.

Publication List

10.3390/toxins11030177;
Duracova M, Klimentova J, Myslivcova Fucikova A, Zidkova L, Sheshko V, Rehulkova H, Dresler J, Krocova Z, Toxins. Toxins (Basel), 11(3):(2019) [pubmed]

10.3390/toxins11030177;

Duracova M, Klimentova J, Myslivcova Fucikova A, Zidkova L, Sheshko V, Rehulkova H, Dresler J, Krocova Z, Toxins. Toxins (Basel), 11(3):(2019) [pubmed]

Keyword List

curator keyword: Biomedical
submitter keyword: PRM
Clostridium perfringens
protein toxin
epsilon toxin

curator keyword: Biomedical

submitter keyword: PRM

Clostridium perfringens

protein toxin

epsilon toxin

Contact List

Zuzana Krocova
contact affiliation	Department of Molecular Pathology, Faculty of Military Health Sciences, University of Defense, Hradec Kralove, Czech Republic
contact email	zuzana.krocova@unob.cz
lab head
Miloslava Ďuráčová
contact affiliation	University of Defence
contact email	miloslava.duracova@seznam.cz
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/03/PXD012528
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/03/PXD012528

PRIDE project URI

Repository Record List

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