PXD012316

PXD012316 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Phosphoproteomics of endothelin signalling
Description	Time resolved phosphorylation changes were measured the melanoma cell lines A2058 and UACC257. An endothelin B receptor knockout of UACC257 was processed in parallel. Protein abundance was also compared at the latest time point of the study (90 min) using DIA-SWATH
HostingRepository	PRIDE
AnnounceDate	2019-10-11
AnnouncementXML	Submission_2019-10-11_08:00:44.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Alexander Schäfer
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	6x(13)C,4x(15)N labeled L-arginine; 6x(13)C,2x(15)N labeled L-lysine; phosphorylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Elite; TripleTOF 6600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-01-14 00:52:25	ID requested
1	2019-07-08 02:48:56	announced
⏵ 2	2019-10-11 08:00:46	announced	2019-10-11: Updated project metadata.

Publication List

Sch, ä, fer A, Gjerga E, Welford RW, Renz I, Lehembre F, Groenen PM, Saez-Rodriguez J, Aebersold R, Gstaiger M, Elucidating essential kinases of endothelin signalling by logic modelling of phosphoproteomics data. Mol Syst Biol, 15(8):e8828(2019) [pubmed]

Sch, ä, fer A, Gjerga E, Welford RW, Renz I, Lehembre F, Groenen PM, Saez-Rodriguez J, Aebersold R, Gstaiger M, Elucidating essential kinases of endothelin signalling by logic modelling of phosphoproteomics data. Mol Syst Biol, 15(8):e8828(2019) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: endothelin, phosphoproteomics, signalling

curator keyword: Biological

submitter keyword: endothelin, phosphoproteomics, signalling

Contact List

Ruedi Aebersold
contact affiliation	Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, Auguste-Piccard-Hof 1, 8093 Zurich, Switzerland
contact email	aebersold@imsb.biol.ethz.ch
lab head
Alexander Schäfer
contact affiliation	ETH Zurich
contact email	schaefer@imsb.biol.ethz.ch
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/10/PXD012316
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/10/PXD012316

PRIDE project URI

Repository Record List

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