PXD012309

PXD012309 is an original dataset announced via ProteomeXchange.

Title	Bordetella parapertussis shotgun proteomic analysis reveals physiological response to iron starvation and potential new virulence determinants absent in Bordetella pertussis
Description	To our knowledge, we provide the first proteomics study of Bordetella parapertussis, one of the causative agents of whooping cough. We compared the identified proteins different to Bordetella pertussis, the other pathogen causing whooping cough. In addition, we extended the study to investigate the proteome response to iron limitation, a stress condition the pathogens face while infection.
HostingRepository	PRIDE
AnnounceDate	2020-02-05
AnnouncementXML	Submission_2020-02-05_05:53:54.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Kristin Surmann
SpeciesList	scientific name: Bordetella parapertussis; NCBI TaxID: 519;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2019-01-11 05:25:42	ID requested
⏵ 1	2020-02-05 05:53:55	announced

Oviedo JM, Surmann K, Gorgojo JP, Valdez H, Dhople VM, Lamberti Y, V, ö, lker U, Rodriguez ME, Shotgun proteomic analysis of Bordetella parapertussis provides insights into the physiological response to iron starvation and potential new virulence determinants absent in Bordetella pertussis. J Proteomics, 206():103448(2019) [pubmed]

curator keyword: Biomedical

submitter keyword: Bordetella parapertussis, shotgun proteomics, iron limitation

Prof. Dr. Uwe Völker
contact affiliation	University Medicine Greifswald
contact email	voelker@uni-greifswald.de
lab head
Kristin Surmann
contact affiliation	University Medicine Greifswald
contact email	surmannk@uni-greifswald.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/02/PXD012309

PRIDE project URI

• PRIDE
  1. PXD012309
     1. Label: PRIDE project
     2. Name: Bordetella parapertussis shotgun proteomic analysis reveals physiological response to iron starvation and potential new virulence determinants absent in Bordetella pertussis