PXD012264

PXD012264 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	RTNs and DP1 Knockdown in neurons
Description	Quantitative proteomics results of RTNs-KD neurons or DP1-KD neurons (DIV5). Peptides derived from Untreated neurons (UNT) were chemically labeled with TMT-126, pSuper-neurons with TMT-127, shRNAs_RTNs-neurons with TMT-128 and shRNA_DP1-neurons with TMT-131.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:51:54.148.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Riccardo Stucchi
SpeciesList	scientific name: Rattus norvegicus (Rat); NCBI TaxID: 10116;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-01-08 01:05:18	ID requested
1	2019-02-15 14:42:47	announced
2	2019-09-25 01:52:16	announced	2019-09-25: Updated publication reference for PubMed record(s): 30772082.
⏵ 3	2024-10-22 04:52:00	announced	2024-10-22: Updated project metadata.

Publication List

10.1016/j.neuron.2019.01.030;
Far, í, as GG, Fr, é, al A, Tortosa E, Stucchi R, Pan X, Portegies S, Will L, Altelaar M, Hoogenraad CC, Feedback-Driven Mechanisms between Microtubules and the Endoplasmic Reticulum Instruct Neuronal Polarity. Neuron, 102(1):184-201.e8(2019) [pubmed]

10.1016/j.neuron.2019.01.030;

Far, í, as GG, Fr, é, al A, Tortosa E, Stucchi R, Pan X, Portegies S, Will L, Altelaar M, Hoogenraad CC, Feedback-Driven Mechanisms between Microtubules and the Endoplasmic Reticulum Instruct Neuronal Polarity. Neuron, 102(1):184-201.e8(2019) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: cortical neurons, RTN, TMT labeling, DP1, shRNA.

curator keyword: Biological

submitter keyword: cortical neurons, RTN, TMT labeling, DP1, shRNA.

Contact List

Casper Hoogenraad
contact affiliation	Cell Biology, Faculty of Science, Utrecht University, TheNetherlands
contact email	c.hoogenraad@uu.nl
lab head
Riccardo Stucchi
contact affiliation	Utrecht University
contact email	r.stucchi@uu.nl
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/02/PXD012264
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/02/PXD012264

PRIDE project URI

Repository Record List

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