PXD012076

PXD012076 is an original dataset announced via ProteomeXchange.

Title	Proteomic response of the early divergent liverwort Marchantia polymorpha during infection with the oomycete pathogen Phytophthora palmivora
Description	Here, we define the proteomic response of the early divergent liverwort Marchantia polymorpha during infection with the oomycete pathogen Phytophthora palmivora. We sampled whole liverwort thalli that were mock-inoculated (water) or infected with P. palmivora zoospores at 4 and 8 days post inoculation (dpi). This analysis revealed the protein profiles of liverworts during the biotrophic (4 dpi) and necrotrophic (8 dpi) stages of pathogen infection. In combination with additional omics datasets, our analyses reveal conserved aspects in the molecular response to pathogen infection in liverworts and angiosperms.
HostingRepository	PRIDE
AnnounceDate	2019-06-24
AnnouncementXML	Submission_2019-07-18_00:23:53.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sara Christina Stolze
SpeciesList	scientific name: Marchantia polymorpha subsp. ruderalis; NCBI TaxID: 1480154;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2018-12-17 00:04:27	ID requested
1	2019-06-24 09:56:25	announced
⏵ 2	2019-07-18 00:23:54	announced	Updated publication reference for PubMed record(s): 31303485.

Carella P, Gogleva A, Hoey DJ, Bridgen AJ, Stolze SC, Nakagami H, Schornack S, Conserved Biochemical Defenses Underpin Host Responses to Oomycete Infection in an Early-Divergent Land Plant Lineage. Curr Biol, 29(14):2282-2294.e5(2019) [pubmed]

curator keyword: Biological

submitter keyword: Marchantia polymorpha, plant immunity, pathogen-response, LC-MS/MS

Hirofumi Nakagami
contact affiliation	Basic Immune System of Plants / Protein Mass Spectrometry Max Planck Institute for Plant Breeding Research Carl-von-Linne-Weg 10, 50829 Cologne, Germany
contact email	nakagami@mpipz.mpg.de
lab head
Sara Christina Stolze
contact affiliation	Plant Proteomics and Mass Spectrometry Group Max Planck Institute for Plant Breeding Research Carl-von-Linné Weg 10 50829 Cologne
contact email	stolze@mpipz.mpg.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/06/PXD012076

PRIDE project URI

• PRIDE
  1. PXD012076
     1. Label: PRIDE project
     2. Name: Proteomic response of the early divergent liverwort Marchantia polymorpha during infection with the oomycete pathogen Phytophthora palmivora