PXD011975

PXD011975 is an original dataset announced via ProteomeXchange.

Title	Cephalopod Chromatophore Proteomics
Description	using the first annotated squid chromatophore proteome together with microscopy, we identified likely biochemical components of this reflective coloration as structural reflectin proteins distributed in cells that completely envelop each chromatocyte. Within the chromatocytes, where the pigment molecules reside in nanostructured granules, we found the lens protein Ω- crystallin.
HostingRepository	PRIDE
AnnounceDate	2019-03-05
AnnouncementXML	Submission_2019-03-05_07:26:57.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Feixia Chu
SpeciesList	scientific name: Doryteuthis pealeii; NCBI TaxID: 1051067;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2018-12-07 01:18:45	ID requested
⏵ 1	2019-03-05 07:26:58	announced

Williams TL, Senft SL, Yeo J, Mart, í, n-Mart, í, nez FJ, Kuzirian AM, Martin CA, DiBona CW, Chen CT, Dinneen SR, Nguyen HT, Gomes CM, Rosenthal JJC, MacManes MD, Chu F, Buehler MJ, Hanlon RT, Deravi LF, Dynamic pigmentary and structural coloration within cephalopod chromatophore organs. Nat Commun, 10(1):1004(2019) [pubmed]

ProteomeXchange project tag: Protein Misfolding and Aggregation (B/D-HPP), Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project

curator keyword: Biological

submitter keyword: Cephalopod molluscs, pigments, chromatophore, Ω- crystallin

Feixia Chu
contact affiliation	University of New Hampshire
contact email	feixia.chu@unh.edu
lab head
Feixia Chu
contact affiliation	University of New Hampshire
contact email	feixia.chu@unh.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/03/PXD011975

PRIDE project URI

• PRIDE
  1. PXD011975
     1. Label: PRIDE project
     2. Name: Cephalopod Chromatophore Proteomics