PXD011804

PXD011804 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Discovery and qualification of serum protein biomarkers for cholangiocarcinoma diagnosis
Description	The aim of the study is to discover and qualify serum protein biomarkers for cholangiocarcinoma diagnosis. Serum samples from normal, periductal fibrosis and CCA groups were screened using LC-MS/MS and MRM/MS as described in manuscript.
HostingRepository	PRIDE
AnnounceDate	2019-08-26
AnnouncementXML	Submission_2019-08-26_00:53:50.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Kassaporn Duangkumpha
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue
Instrument	TripleTOF 5600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-11-23 01:17:06	ID requested
⏵ 1	2019-08-26 00:53:51	announced

Publication List

Duangkumpha K, Stoll T, Phetcharaburanin J, Yongvanit P, Thanan R, Techasen A, Namwat N, Khuntikeo N, Chamadol N, Roytrakul S, Mulvenna J, Mohamed A, Shah AK, Hill MM, Loilome W, Discovery and Qualification of Serum Protein Biomarker Candidates for Cholangiocarcinoma Diagnosis. J Proteome Res, 18(9):3305-3316(2019) [pubmed]

Duangkumpha K, Stoll T, Phetcharaburanin J, Yongvanit P, Thanan R, Techasen A, Namwat N, Khuntikeo N, Chamadol N, Roytrakul S, Mulvenna J, Mohamed A, Shah AK, Hill MM, Loilome W, Discovery and Qualification of Serum Protein Biomarker Candidates for Cholangiocarcinoma Diagnosis. J Proteome Res, 18(9):3305-3316(2019) [pubmed]

Keyword List

curator keyword: Biomedical
submitter keyword: cholangiocarcinoma
proteomics
mass spectrometry
multiple reaction monitoring
serum biomarker discovery pipeline

curator keyword: Biomedical

submitter keyword: cholangiocarcinoma

proteomics

mass spectrometry

multiple reaction monitoring

serum biomarker discovery pipeline

Contact List

Watcharin Loilome
contact affiliation	Department of Biochemistry, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand 40002
contact email	loilomew@gmail.com
lab head
Kassaporn Duangkumpha
contact affiliation	Department of Biochemistry, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand 40002
contact email	kassaporn.d@kkumail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/08/PXD011804
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/08/PXD011804

PRIDE project URI

Repository Record List

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