PXD011759

PXD011759 is an original dataset announced via ProteomeXchange.

Title	lincomycin treatment wild type and gun1-101
Description	Retrograde signals emanate from the DNA-containing cell organelles (plastids and mitochondria) and control the expression of a large number of nuclear genes in response to environmental and developmental cues. Previous studies on retrograde signaling mainly analyzed the regulation of nuclear gene expression at the transcriptional level. To determine the contribution of post-transcriptional regulation to plastid retrograde signaling, we combined label-free proteomics with transcriptomic analysis of Arabidopsis thaliana seedlings and studied the response in whichto interference with the plastid gene expression (PGE) pathway of retrograde signaling.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:50:29.516.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Guo-Zhang Wu
SpeciesList	scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationList	monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2018-11-20 02:04:33	ID requested
1	2019-06-05 01:47:50	announced
⏵ 2	2024-10-22 04:50:37	announced	2024-10-22: Updated project metadata.

Wu GZ, Meyer EH, Wu S, Bock R, Extensive Posttranscriptional Regulation of Nuclear Gene Expression by Plastid Retrograde Signals. Plant Physiol, 180(4):2034-2048(2019) [pubmed]

10.1104/pp.19.00421;

curator keyword: Biological

submitter keyword: Arabidopsis, retrograde signaling

Ralph Bock
contact affiliation	Max Planck Institute of Molecular Plant Physiology Am Muehlenberg 1 D-14476 Potsdam-Golm Germany
contact email	rbock@mpimp-golm.mpg.de
lab head
Guo-Zhang Wu
contact affiliation	Max-Planck institute of molecular plant physiology
contact email	gzwu@mpimp-golm.mpg.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/06/PXD011759

PRIDE project URI

• PRIDE
  1. PXD011759
     1. Label: PRIDE project
     2. Name: lincomycin treatment wild type and gun1-101