PXD011616

PXD011616 is an original dataset announced via ProteomeXchange.

Title	Proteomics and direct Protein-SIF of the bacterial ectosymbionts of the ciliate Kentrophoros sp. H
Description	Kentrophoros ciliates are found worldwide in coastal marine sediment, and have an obligate symbiosis with sulfur-oxidizing Gammaproteobacteria called Candidatus Kentron. The genomes of different Kentron species suggest that they are chemolithoheterotrophs, producing new biomass from organic carbon substrates. We investigated the metaproteome of Kentrophoros sp. H and its symbiont (from two sites in the Mediterranean), to verify that hypothesized pathways of carbon and energy metabolism are indeed expressed, and to estimate the stable isotope fractionation in biomass, which can be a signature of the carbon sources used by the organism.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:49:55.623.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Manuel Kleiner
SpeciesList	scientific name: Candidatus Kentron sp. H; NCBI TaxID: 2126337; scientific name: Kentrophoros sp. H; NCBI TaxID: 1905158;
ModificationList	monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2018-11-07 23:56:45	ID requested
1	2019-05-31 03:05:59	announced
⏵ 2	2023-11-14 08:49:56	announced	2023-11-14: Updated project metadata.

Dataset with its publication pending

curator keyword: Biological

submitter keyword: Kentrophoros, Isola d' Elba,1D-LC, thiotrophic symbiosis, Candidatus Kentron, Ciliophora, Mediterranean, metaproteomics, ciliate, metaproteome, Gammaproteobacteria, protist, Protein-SIF, Pampelonne Beach

Brandon K. B. Seah
contact affiliation	Max Planck Institute for Marine Microbiology
contact email	kbseah@mpi-bremen.de
lab head
Manuel Kleiner
contact affiliation	North Carolina State University
contact email	manuel_kleiner@ncsu.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/05/PXD011616

PRIDE project URI

• PRIDE
  1. PXD011616
     1. Label: PRIDE project
     2. Name: Proteomics and direct Protein-SIF of the bacterial ectosymbionts of the ciliate Kentrophoros sp. H