<<< Full experiment listing

PXD011361

PXD011361 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleMass spectrometry data of the ERα-NTD samples exposed to 0-50ms x-ray beam
DescriptionHere we present MS data of ERα-NTD protein samples exposed to 0-50 ms of X-ray beam at the Advanced Light Source (Berkeley, CA). Irradiated protein samples were digested with two sets of proteases, Asp-N and Lys-C, and pepsin. LC-MS/MS data was utilized to identify 16 sites of modification listed in table S3. LC-MS data were used to quantify the extent of oxidative modifications for these 16 residues. Quantification of oxidative modification for all sites has been done manually.
HostingRepositoryPRIDE
AnnounceDate2024-10-07
AnnouncementXMLSubmission_2024-10-07_10:19:26.657.xml
DigitalObjectIdentifierhttps://dx.doi.org/10.6019/PXD011361
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterJanna Kiselar
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListOxidation
InstrumentLTQ Orbitrap Elite
Dataset History
RevisionDatetimeStatusChangeLog Entry
02018-10-15 08:38:15ID requested
12024-10-07 10:19:27announced
Publication List
10.1016/j.str.2018.10.026;
10.6019/PXD011361;
Peng Y, Cao S, Kiselar J, Xiao X, Du Z, Hsieh A, Ko S, Chen Y, Agrawal P, Zheng W, Shi W, Jiang W, Yang L, Chance MR, Surewicz WK, Buck M, Yang S, A Metastable Contact and Structural Disorder in the Estrogen Receptor Transactivation Domain. Structure, 27(2):229-240.e4(2019) [pubmed]
Keyword List
submitter keyword: ERα-NTD, LC-MS, FP
Contact List
Janna Kiselar
contact affiliationCenter for Proteomics and Department of Nutrition, School of Medicine, Case Western Reserve University, Cleveland, OH
contact emailjxk217@case.edu
lab head
Janna Kiselar
contact affiliationCase Western Reserve University
contact emailjxk217@case.edu
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/05/PXD011361
PRIDE project URI
Repository Record List
[ + ]