PXD011361

PXD011361 is an original dataset announced via ProteomeXchange.

Title	Mass spectrometry data of the ERα-NTD samples exposed to 0-50ms x-ray beam
Description	Here we present MS data of ERα-NTD protein samples exposed to 0-50 ms of X-ray beam at the Advanced Light Source (Berkeley, CA). Irradiated protein samples were digested with two sets of proteases, Asp-N and Lys-C, and pepsin. LC-MS/MS data was utilized to identify 16 sites of modification listed in table S3. LC-MS data were used to quantify the extent of oxidative modifications for these 16 residues. Quantification of oxidative modification for all sites has been done manually.
HostingRepository	PRIDE
AnnounceDate	2024-10-07
AnnouncementXML	Submission_2024-10-07_10:19:26.657.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD011361
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Janna Kiselar
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	Oxidation
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2018-10-15 08:38:15	ID requested
⏵ 1	2024-10-07 10:19:27	announced

10.1016/j.str.2018.10.026;

10.6019/PXD011361;

Peng Y, Cao S, Kiselar J, Xiao X, Du Z, Hsieh A, Ko S, Chen Y, Agrawal P, Zheng W, Shi W, Jiang W, Yang L, Chance MR, Surewicz WK, Buck M, Yang S, A Metastable Contact and Structural Disorder in the Estrogen Receptor Transactivation Domain. Structure, 27(2):229-240.e4(2019) [pubmed]

submitter keyword: ERα-NTD, LC-MS, FP

Janna Kiselar
contact affiliation	Center for Proteomics and Department of Nutrition, School of Medicine, Case Western Reserve University, Cleveland, OH
contact email	jxk217@case.edu
lab head
Janna Kiselar
contact affiliation	Case Western Reserve University
contact email	jxk217@case.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/05/PXD011361

PRIDE project URI

• PRIDE
  1. PXD011361
     1. Label: PRIDE project
     2. Name: Mass spectrometry data of the ERα-NTD samples exposed to 0-50ms x-ray beam