PXD011228 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | IgA deglycosylation to identify glycosylation sites |
Description | In order to provide information on the peptide sequence of the IgA glycopeptides, a proteomics analysis was run on LC-MS/MS data of N-glycosidase F-digested IgA samples, in which the N-glycans had been released. The samples included IgA (isolated) from: 1) the saliva samples from two healthy donors, 2) a pooled-plasma standard from a minimum of 20 human donors (VisuCon-F Frozen Normal Control Plasma; Affinity Biologicals, Ancaster, Canada), 3) 10 μg of a human plasma-derived IgA standard (Lee Biosolutions, Maryland Heights, MO), and 4) a human colostrum-derived SIgA standard (Athens Research and Technology, Athens, GA). |
HostingRepository | PRIDE |
AnnounceDate | 2018-11-09 |
AnnouncementXML | Submission_2018-11-09_08:10:18.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Noortje de Haan |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | iodoacetamide derivatized residue; deamidated residue |
Instrument | maXis |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2018-09-28 08:20:38 | ID requested | |
⏵ 1 | 2018-11-09 08:10:20 | announced | |
Publication List
Plomp R, de Haan N, Bondt A, Murli J, Dotz V, Wuhrer M, Comparative Glycomics of Immunoglobulin A and G From Saliva and Plasma Reveals Biomarker Potential. Front Immunol, 9():2436(2018) [pubmed] |
Keyword List
submitter keyword: IgA, secretory IgA, saliva, plasma, colostrum |
Contact List
Manfred Wuhrer |
contact affiliation | Center for Proteomics and Metabolomics, Leiden University Medical Center, Leiden, The Netherlands |
contact email | m.wuhrer@lumc.nl |
lab head | |
Noortje de Haan |
contact affiliation | LUMC |
contact email | n.de_haan@lumc.nl |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/11/PXD011228 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD011228
- Label: PRIDE project
- Name: IgA deglycosylation to identify glycosylation sites