PXD011228

PXD011228 is an original dataset announced via ProteomeXchange.

Title	IgA deglycosylation to identify glycosylation sites
Description	In order to provide information on the peptide sequence of the IgA glycopeptides, a proteomics analysis was run on LC-MS/MS data of N-glycosidase F-digested IgA samples, in which the N-glycans had been released. The samples included IgA (isolated) from: 1) the saliva samples from two healthy donors, 2) a pooled-plasma standard from a minimum of 20 human donors (VisuCon-F Frozen Normal Control Plasma; Affinity Biologicals, Ancaster, Canada), 3) 10 μg of a human plasma-derived IgA standard (Lee Biosolutions, Maryland Heights, MO), and 4) a human colostrum-derived SIgA standard (Athens Research and Technology, Athens, GA).
HostingRepository	PRIDE
AnnounceDate	2018-11-09
AnnouncementXML	Submission_2018-11-09_08:10:18.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Noortje de Haan
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue; deamidated residue
Instrument	maXis

Revision	Datetime	Status	ChangeLog Entry
0	2018-09-28 08:20:38	ID requested
⏵ 1	2018-11-09 08:10:20	announced

Plomp R, de Haan N, Bondt A, Murli J, Dotz V, Wuhrer M, Comparative Glycomics of Immunoglobulin A and G From Saliva and Plasma Reveals Biomarker Potential. Front Immunol, 9():2436(2018) [pubmed]

submitter keyword: IgA, secretory IgA, saliva, plasma, colostrum

Manfred Wuhrer
contact affiliation	Center for Proteomics and Metabolomics, Leiden University Medical Center, Leiden, The Netherlands
contact email	m.wuhrer@lumc.nl
lab head
Noortje de Haan
contact affiliation	LUMC
contact email	n.de_haan@lumc.nl
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/11/PXD011228

PRIDE project URI

• PRIDE
  1. PXD011228
     1. Label: PRIDE project
     2. Name: IgA deglycosylation to identify glycosylation sites