PXD011212

PXD011212 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	A rapid methods development workflow for high-throughput quantitative proteomic applications
Description	we developed a workflow using data acquired from discovery proteomic experiments, retention time prediction, and standard-flow chromatography to rapidly develop targeted proteomic assays
HostingRepository	PRIDE
AnnounceDate	2019-06-27
AnnouncementXML	Submission_2019-06-27_00:37:28.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD011212
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Christopher Petzold
SpeciesList	scientific name: Escherichia coli; NCBI TaxID: 562;
ModificationList	Ammonia-loss; Deamidated; Dehydrated; Oxidation; Acetyl; Carbamidomethyl
Instrument	6550 iFunnel Q-TOF LC/MS

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-09-28 05:18:58	ID requested
⏵ 1	2019-06-27 00:37:30	announced

Publication List

Chen Y, Vu J, Thompson MG, Sharpless WA, Chan LJG, Gin JW, Keasling JD, Adams PD, Petzold CJ, A rapid methods development workflow for high-throughput quantitative proteomic applications. PLoS One, 14(2):e0211582(2019) [pubmed]

Chen Y, Vu J, Thompson MG, Sharpless WA, Chan LJG, Gin JW, Keasling JD, Adams PD, Petzold CJ, A rapid methods development workflow for high-throughput quantitative proteomic applications. PLoS One, 14(2):e0211582(2019) [pubmed]

Keyword List

curator keyword: Technical
submitter keyword: Proteomics, high-throughput, workflow

curator keyword: Technical

submitter keyword: Proteomics, high-throughput, workflow

Contact List

Christopher J petzold
contact affiliation	Staff Scientist Biological Systems & Engineering Division Lawrence Berkeley National Laboratory
contact email	cjpetzold@lbl.gov
lab head
Christopher Petzold
contact affiliation	Lawrence Berkeley National Laboratory
contact email	cjpetzold@lbl.gov
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/06/PXD011212
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/06/PXD011212

PRIDE project URI

Repository Record List

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