PXD011148

PXD011148 is an original dataset announced via ProteomeXchange.

Title	Shotgun proteomic profiling of skin mucus common carp (Cyprinus carpio)
Description	Ichthyophthirius multifiliis is a ciliated protozoan parasite recognized as one of the most pathogenic diseases of wild and cultured freshwater fish. Fish skin mucus plays a significant role against invading pathogens. However, the protein-based modulation against infection with I. multifiliis, of host fish at this barrier is unknown. The aim of this study was to investigate the modulation of the skin mucus after infection with I. multifiliis using quantitative proteomics to provide insights into the post-transcriptional and post-translational regulation of skin mucus proteins. Thus, we investigated the skin mucus proteome of common carp (Cyprinus carpio) using a shotgun proteomic approach at days 1 and 9 after I. multifiliis exposure.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:15:30.534.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Gokhlesh Kumar
SpeciesList	scientific name: Cyprinus carpio (Common carp); NCBI TaxID: 7962;
ModificationList	iodoacetamide derivatized residue
Instrument	TripleTOF 5600

Revision	Datetime	Status	ChangeLog Entry
0	2018-09-19 07:50:55	ID requested
1	2018-11-13 23:56:57	announced
⏵ 2	2024-10-22 04:15:31	announced	2024-10-22: Updated project metadata.

Saleh M, Kumar G, Abdel-Baki AS, Dkhil MA, El-Matbouli M, Al-Quraishy S, Quantitative proteomic profiling of immune responses to Ichthyophthirius multifiliis in common carp skin mucus. Fish Shellfish Immunol, 84():834-842(2019) [pubmed]

10.1016/j.fsi.2018.10.078;

Saleh M, Kumar G, Abdel-Baki AA, Dkhil MA, El-Matbouli M, Al-Quraishy S, Quantitative shotgun proteomics distinguishes wound-healing biomarker signatures in common carp skin mucus in response to Ichthyophthirius multifiliis. Vet Res, 49(1):37(2018) [pubmed]

10.1186/s13567-018-0535-9;

curator keyword: Biological

submitter keyword: Common carp, LC MS-MS, protozoan parasite, Ichthyophthirius multifiliis, Mucus proteome profile

Dr. Mona Saleh
contact affiliation	Clinical Division of Fish Medicine, University of Veterinary Medicine, Vienna, Austria
contact email	mona.saleh@vetmeduni.ac.at
lab head
Gokhlesh Kumar
contact affiliation	University of Veterinary Medicine, Vienna
contact email	Gokhlesh.Kumar@vetmeduni.ac.at
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/11/PXD011148

PRIDE project URI

• PRIDE
  1. PXD011148
     1. Label: PRIDE project
     2. Name: Shotgun proteomic profiling of skin mucus common carp (Cyprinus carpio)