PXD011093

PXD011093 is an original dataset announced via ProteomeXchange.

Title	The ProCan90 HEK293 dataset - A Case Study and Methodology for OpenSWATH Parameter Optimization Using the ProCan90 Data Set and 45 810 Computational Analysis Runs
Description	A collection of HEK293 SWATH-MS raw data files generated as part of the routine operation of the ProCan experimental facility. These files represent technical replicates each being an aliquot from the same pooled digest, with fifteen runs collected from each of the six Sciex Triple TOF 6600 mass spectrometers, giving a total of 90 raw data files.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:48:55.789.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sean Peters
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	TripleTOF 6600

Revision	Datetime	Status	ChangeLog Entry
0	2018-09-14 02:54:15	ID requested
1	2019-04-11 00:36:26	announced
⏵ 2	2024-10-22 04:49:03	announced	2024-10-22: Updated project metadata.

Peters S, Hains PG, Lucas N, Robinson PJ, Tully B, 810 Computational Analysis Runs. J Proteome Res, 18(3):1019-1031(2019) [pubmed]

10.1021/acs.jproteome.8b00709;

ProteomeXchange project tag: Cancer (B/D-HPP), Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project

submitter keyword: Human, LC-MS, ProCan

Roger Reddel
contact affiliation	Children's Medical Research Institute
contact email	rreddel@cmri.org.au
lab head
Sean Peters
contact affiliation	Children's Medical Research Institute
contact email	speters@cmri.org.au
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/04/PXD011093

PRIDE project URI

• PRIDE
  1. PXD011093
     1. Label: PRIDE project
     2. Name: The ProCan90 HEK293 dataset - A Case Study and Methodology for OpenSWATH Parameter Optimization Using the ProCan90 Data Set and 45 810 Computational Analysis Runs