PXD011077

PXD011077 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Cross-ID: An Interactive Platform for in-depth Analysis and Visualization of Complex XL-MS Driven Protein Interaction Networks
Description	Software platform dedicated to XL-MS interactive data analysis and visualization
HostingRepository	PRIDE
AnnounceDate	2023-05-15
AnnouncementXML	Submission_2023-05-15_02:23:10.937.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	OlegKlykov
SpeciesList	scientific name: Bos taurus (Bovine); NCBI TaxID: 9913;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-09-13 01:57:04	ID requested
1	2019-01-02 01:19:30	announced
⏵ 2	2023-05-15 02:23:11	announced	2023-05-15: Updated project metadata.

Publication List

de Graaf SC, Klykov O, van den Toorn H, Scheltema RA, Cross-ID: Analysis and Visualization of Complex XL-MS-Driven Protein Interaction Networks. J Proteome Res, 18(2):642-651(2019) [pubmed]

de Graaf SC, Klykov O, van den Toorn H, Scheltema RA, Cross-ID: Analysis and Visualization of Complex XL-MS-Driven Protein Interaction Networks. J Proteome Res, 18(2):642-651(2019) [pubmed]

Keyword List

ProteomeXchange project tag: EPIC-XS
curator keyword: Technical, Biological
submitter keyword: Proteome Discoverer,XL-MS, TMT, Visualization

ProteomeXchange project tag: EPIC-XS

curator keyword: Technical, Biological

submitter keyword: Proteome Discoverer,XL-MS, TMT, Visualization

Contact List

Prof. dr. Albert J. R.Heck
contact affiliation	Biomolecular Mass Spectrometry and Proteomics Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences Utrecht University
contact email	A.J.R.Heck@uu.nl
lab head
OlegKlykov
contact affiliation	Utrecht University
contact email	o.klykov@uu.nl
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/01/PXD011077
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/01/PXD011077

PRIDE project URI

Repository Record List

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