PXD011072

PXD011072 is an original dataset announced via ProteomeXchange.

Title	Tomato xylem sap proteome composition following endophyte- and R-gene mediated resistance towards Fusarium oxysporum f.sp. lycopersici inoculation.
Description	Xylem sap proteome studies on susceptible or resistant tomato (Solanum lycopersicum) inoculated with endophytic and/or pathogenic strains of Fusarium oxysporum f.sp. lycopersici were conducted to get insights into the molecular differences between endophyte- and R-gene-mediated resistance (EMR and RMR). The EMR and RMR proteomes were compared to each other and to the mock control. Interestingly, specific PR-5 isoforms were found to exclusively accumulate during endophyte or genetic resistance, providing excellent markers to distinguish both resistance types at the molecular level.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:48:48.620.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sjef Boeren
SpeciesList	scientific name: Solanum lycopersicum; NCBI TaxID: 4081; scientific name: Fusarium oxysporum f. sp. lycopersici 4287; NCBI TaxID: 426428; scientific name: Fusarium oxysporum Fo47; NCBI TaxID: 660027;
ModificationList	monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue; deamidated residue
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2018-09-12 03:53:47	ID requested
1	2019-11-14 02:20:18	announced
⏵ 2	2024-10-22 04:48:53	announced	2024-10-22: Updated project metadata.

10.3389/fmicb.2018.02977;

de Lamo FJ, Constantin ME, Fresno DH, Boeren S, Rep M, Takken FLW, Gene- and Endophyte-Mediated Resistance Against Fusarium Wilt Disease in Tomato. Front Microbiol, 9():2977(2018) [pubmed]

curator keyword: Biological

submitter keyword: exosomes, proteomics, NP24, PR-5x, biocontrol,endophyte, Fusarium wilt disease

Sjef Boeren
contact affiliation	Wageningen University
contact email	sjef.boeren@wur.nl
lab head
Sjef Boeren
contact affiliation	Biochemistry
contact email	sjef.boeren@wur.nl
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/11/PXD011072

PRIDE project URI

• PRIDE
  1. PXD011072
     1. Label: PRIDE project
     2. Name: Tomato xylem sap proteome composition following endophyte- and R-gene mediated resistance towards Fusarium oxysporum f.sp. lycopersici inoculation.