PXD011070

PXD011070 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	RawTools Parsing of Orbitrap Raw Data Files - HeLa subset analysis
Description	RawTools is a software that provides parsing and quantification of raw Thermo Orbitrap mass spectrometer data. RawTools software was used to process a subset of injections (n = 10) from a prepared HeLa digest that were analyzed on an Orbitrap Velos to get instrument performance metrics.
HostingRepository	PRIDE
AnnounceDate	2018-09-18
AnnouncementXML	Submission_2018-09-18_06:42:10.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD011070
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Christopher Hughes
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	Ammonia-loss; Glu->pyro-Glu; Oxidation; Acetyl; Carbamidomethyl; Gln->pyro-Glu
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-09-12 03:34:22	ID requested
⏵ 1	2018-09-18 06:42:11	announced

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

curator keyword: Technical
submitter keyword: RawQuant, Orbitrap, Mass Spectrometry, Quality Control, Isobaric Tag Quantification, Label-free Quantification, Method Optimization

curator keyword: Technical

submitter keyword: RawQuant, Orbitrap, Mass Spectrometry, Quality Control, Isobaric Tag Quantification, Label-free Quantification, Method Optimization

Contact List

Gregg Morin
contact affiliation	Head of Proteomics
contact email	gmorin@bcgsc.ca
lab head
Christopher Hughes
contact affiliation	BC Cancer Agency
contact email	chughes@bcgsc.ca
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/09/PXD011070
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/09/PXD011070

PRIDE project URI

Repository Record List

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