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PXD011069

DataSet Summary

  • HostingRepository: PRIDE
  • AnnounceDate: 2018-09-18
  • AnnouncementXML: Submission_2018-09-18_07:24:13.xml
  • DigitalObjectIdentifier:
  • ReviewLevel: Peer-reviewed dataset
  • DatasetOrigin: Original data
  • RepositorySupport: Unsupported dataset by repository
  • PrimarySubmitter: Christopher Hughes
  • Title: RawTools Parsing of Orbitrap Raw Data Files -Quality control analysis
  • Description: RawTools is a software that provides parsing and quantification of raw Thermo Orbitrap mass spectrometer data. RawTools software was used to process a set of injections (n = 140) from a prepared HeLa digest that were analyzed on an Orbitrap Velos to get summarized instrument performance metrics for quality control.
  • SpeciesList: scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
  • ModificationList: monohydroxylated residue; iodoacetamide derivatized residue
  • Instrument: LTQ Orbitrap Velos

Dataset History

VersionDatetimeStatusChangeLog Entry
02018-09-12 03:34:03ID requested
12018-09-18 07:24:13announced

Publication List

  1. Dataset with its publication pending

Keyword List

  1. curator keyword: Technical
  2. submitter keyword: RawQuant, Orbitrap, Mass Spectrometry, Quality Control, Isobaric Tag Quantification, Label-free Quantification, Method Optimization

Contact List

    Gregg Morin
    • contact affiliation: Head of Proteomics
    • contact email: gmorin@bcgsc.ca
    • lab head:
    Christopher Hughes
    • contact affiliation: BC Cancer Agency
    • contact email: chughes@bcgsc.ca
    • dataset submitter:

Full Dataset Link List

  1. Dataset FTP location
  2. PRIDE project URI
Repository Record List
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