PXD011064

PXD011064 is an original dataset announced via ProteomeXchange.

Title	Label free SWATH proteomics reveals sex-biased proteins potentially associated with sex expression and modification in dioecious C. grandis
Description	Dioecy is an important sexual system wherein, male and female flowers are borne on separate unisexual plants. Knowledge of sex-related differences can enhance our understanding in molecular and developmental processes leading to unisexual flower development. Coccinia grandis is a dioecious species belonging to Cucurbitaceae, a family well-known for diverse sexual systems. Male and female plants of C. grandis have 22A+XY and 22A+XX chromosomes respectively. Previously, we have reported a gynomonoecious form (GyM) (22A+XX) of C. grandis bearing morphologically hermaphrodite flowers (GyM-H) and female flowers (GyM-F). Also, we showed that foliar spray of silver nitrate on female C. grandis plant induces development of morphologically hermaphrodite buds (Ag-H) despite the absence of Y chromosome. To identify sex-related differences, total protein from the flower buds of male, female, GyM-H and Ag-H of C. grandis at early and middle stages of development were analysed by a powerful label-free proteomics approach on ABSCIEX Triple TOF 5600 platform.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:48:55.669.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Anjan Banerjee
SpeciesList	scientific name: Coccinia grandis; NCBI TaxID: 387127;
ModificationList	iodoacetic acid derivatized residue
Instrument	TripleTOF 5600

Revision	Datetime	Status	ChangeLog Entry
0	2018-09-11 08:53:42	ID requested
1	2019-07-29 03:35:02	announced
⏵ 2	2024-10-22 04:49:03	announced	2024-10-22: Updated project metadata.

Devani RS, Chirmade T, Sinha S, Bendahmane A, Dholakia BB, Banerjee AK, Banerjee J, Flower bud proteome reveals modulation of sex-biased proteins potentially associated with sex expression and modification in dioecious Coccinia grandis. BMC Plant Biol, 19(1):330(2019) [pubmed]

10.1186/s12870-019-1937-1;

submitter keyword: Sex expression, SWATH, Stamen arrest, Sex modification, Label-free Proteomics, pollen fertility

Dr. Anjan Kumar Banerjee
contact affiliation	Associate Professor & Co-Chair, Biology Division Indian Institute of Science Education and Research (IISER Pune) Dr. Homi Bhabha Road, Pashan, Pune-411008. Maharashtra, India.
contact email	akb@iiserpune.ac.in
lab head
Anjan Banerjee
contact affiliation	Associate Professor
contact email	akb@iiserpune.ac.in
dataset submitter

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PRIDE project URI

• PRIDE
  1. PXD011064
     1. Label: PRIDE project
     2. Name: Label free SWATH proteomics reveals sex-biased proteins potentially associated with sex expression and modification in dioecious C. grandis