PXD011064 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Label free SWATH proteomics reveals sex-biased proteins potentially associated with sex expression and modification in dioecious C. grandis |
Description | Dioecy is an important sexual system wherein, male and female flowers are borne on separate unisexual plants. Knowledge of sex-related differences can enhance our understanding in molecular and developmental processes leading to unisexual flower development. Coccinia grandis is a dioecious species belonging to Cucurbitaceae, a family well-known for diverse sexual systems. Male and female plants of C. grandis have 22A+XY and 22A+XX chromosomes respectively. Previously, we have reported a gynomonoecious form (GyM) (22A+XX) of C. grandis bearing morphologically hermaphrodite flowers (GyM-H) and female flowers (GyM-F). Also, we showed that foliar spray of silver nitrate on female C. grandis plant induces development of morphologically hermaphrodite buds (Ag-H) despite the absence of Y chromosome. To identify sex-related differences, total protein from the flower buds of male, female, GyM-H and Ag-H of C. grandis at early and middle stages of development were analysed by a powerful label-free proteomics approach on ABSCIEX Triple TOF 5600 platform. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:48:55.669.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Anjan Banerjee |
SpeciesList | scientific name: Coccinia grandis; NCBI TaxID: 387127; |
ModificationList | iodoacetic acid derivatized residue |
Instrument | TripleTOF 5600 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2018-09-11 08:53:42 | ID requested | |
1 | 2019-07-29 03:35:02 | announced | |
⏵ 2 | 2024-10-22 04:49:03 | announced | 2024-10-22: Updated project metadata. |
Publication List
Devani RS, Chirmade T, Sinha S, Bendahmane A, Dholakia BB, Banerjee AK, Banerjee J, Flower bud proteome reveals modulation of sex-biased proteins potentially associated with sex expression and modification in dioecious Coccinia grandis. BMC Plant Biol, 19(1):330(2019) [pubmed] |
10.1186/s12870-019-1937-1; |
Keyword List
submitter keyword: Sex expression, SWATH, Stamen arrest, Sex modification, Label-free Proteomics, pollen fertility |
Contact List
Dr. Anjan Kumar Banerjee |
contact affiliation | Associate Professor & Co-Chair, Biology Division Indian Institute of Science Education and Research (IISER Pune) Dr. Homi Bhabha Road, Pashan, Pune-411008. Maharashtra, India. |
contact email | akb@iiserpune.ac.in |
lab head | |
Anjan Banerjee |
contact affiliation | Associate Professor |
contact email | akb@iiserpune.ac.in |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD011064
- Label: PRIDE project
- Name: Label free SWATH proteomics reveals sex-biased proteins potentially associated with sex expression and modification in dioecious C. grandis