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PXD011064

PXD011064 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleLabel free SWATH proteomics reveals sex-biased proteins potentially associated with sex expression and modification in dioecious C. grandis
DescriptionDioecy is an important sexual system wherein, male and female flowers are borne on separate unisexual plants. Knowledge of sex-related differences can enhance our understanding in molecular and developmental processes leading to unisexual flower development. Coccinia grandis is a dioecious species belonging to Cucurbitaceae, a family well-known for diverse sexual systems. Male and female plants of C. grandis have 22A+XY and 22A+XX chromosomes respectively. Previously, we have reported a gynomonoecious form (GyM) (22A+XX) of C. grandis bearing morphologically hermaphrodite flowers (GyM-H) and female flowers (GyM-F). Also, we showed that foliar spray of silver nitrate on female C. grandis plant induces development of morphologically hermaphrodite buds (Ag-H) despite the absence of Y chromosome. To identify sex-related differences, total protein from the flower buds of male, female, GyM-H and Ag-H of C. grandis at early and middle stages of development were analysed by a powerful label-free proteomics approach on ABSCIEX Triple TOF 5600 platform.
HostingRepositoryPRIDE
AnnounceDate2024-10-22
AnnouncementXMLSubmission_2024-10-22_04:48:55.669.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterAnjan Banerjee
SpeciesList scientific name: Coccinia grandis; NCBI TaxID: 387127;
ModificationListiodoacetic acid derivatized residue
InstrumentTripleTOF 5600
Dataset History
RevisionDatetimeStatusChangeLog Entry
02018-09-11 08:53:42ID requested
12019-07-29 03:35:02announced
22024-10-22 04:49:03announced2024-10-22: Updated project metadata.
Publication List
Devani RS, Chirmade T, Sinha S, Bendahmane A, Dholakia BB, Banerjee AK, Banerjee J, Flower bud proteome reveals modulation of sex-biased proteins potentially associated with sex expression and modification in dioecious Coccinia grandis. BMC Plant Biol, 19(1):330(2019) [pubmed]
10.1186/s12870-019-1937-1;
Keyword List
submitter keyword: Sex expression, SWATH, Stamen arrest, Sex modification, Label-free Proteomics, pollen fertility
Contact List
Dr. Anjan Kumar Banerjee
contact affiliationAssociate Professor & Co-Chair, Biology Division Indian Institute of Science Education and Research (IISER Pune) Dr. Homi Bhabha Road, Pashan, Pune-411008. Maharashtra, India.
contact emailakb@iiserpune.ac.in
lab head
Anjan Banerjee
contact affiliationAssociate Professor
contact emailakb@iiserpune.ac.in
dataset submitter
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Dataset FTP location
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