PXD010965

PXD010965 is an original dataset announced via ProteomeXchange.

Title	PLASMA biomarkers of Idiopathic Pulmonary Fibrosis
Description	The aim of the current study is to find plasma-based biomarker candidates for Idiopathic Pulmonary Fibrosis (IPF). Incidence of IPF seems to be increasing in Europe and there is significant mortality associated with IPF. There are no sensistive biomarkers for IPF and diagnosis is entirely clinical and/or histopathological which is often delayed. Minimally invasive biomarkers of IPF would be expected to aid clinicians perfrom early diagnosis of IPF enabling better management of the disease.
HostingRepository	PRIDE
AnnounceDate	2020-05-13
AnnouncementXML	Submission_2020-05-12_22:49:59.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD010965
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Sakari Joenväärä
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	Ammonia-loss; Dehydrated; Oxidation; Carbamidomethyl
Instrument	Synapt MS

Revision	Datetime	Status	ChangeLog Entry
0	2018-08-31 03:23:30	ID requested
⏵ 1	2020-05-12 22:50:00	announced

Saraswat M, Joenv, ä, ä, r, ä S, Tohmola T, Sutinen E, Vartiainen V, Koli K, Myll, ä, rniemi M, Renkonen R, Label-free plasma proteomics identifies haptoglobin-related protein as candidate marker of idiopathic pulmonary fibrosis and dysregulation of complement and oxidative pathways. Sci Rep, 10(1):7787(2020) [pubmed]

curator keyword: Biological, Biomedical

submitter keyword: Label-free proteomics, UDMSE, Idiopathic Pulmonary Fibrosis, Complement activation, Biomarkers

Risto Renkonen
contact affiliation	Transplantation laboratory, Faculty of Medicine, University of Helsinki, Helsinki, 00290, Finland
contact email	risto.renkonen@helsinki.fi
lab head
Sakari Joenväärä
contact affiliation	Helsinki University
contact email	sakari.joenvaara@helsinki.fi
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/05/PXD010965

PRIDE project URI

• PRIDE
  1. PXD010965
     1. Label: PRIDE project
     2. Name: PLASMA biomarkers of Idiopathic Pulmonary Fibrosis