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PXD010941

PXD010941 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleEnhanced RNA Interactome capture (eRIC) and RNA Interactome capture (RIC) of Jurkat cells (DSMZ, ACC-282).
Description1.0 – 1.3 x 10e8 proliferating Jurkat cells at a density of about 1-1.5 x 10e6 cells/mL were employed per sample. Cells were irradiated or not with 254 nm UV light and subjected to eRIC or RIC to determine the RNA-bound proteome. Data correspond to two biologically independent experiments.
HostingRepositoryPRIDE
AnnounceDate2024-10-22
AnnouncementXMLSubmission_2024-10-22_04:07:38.334.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterFrank Stein
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListTMT6plex-126 reporter+balance reagent acylated residue; monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue
InstrumentQ Exactive
Dataset History
RevisionDatetimeStatusChangeLog Entry
02018-08-30 02:29:34ID requested
12018-09-03 04:00:31announced
22018-09-11 00:36:24announcedUpdated project metadata.
32018-11-04 14:48:23announcedUpdated project metadata.
42024-10-22 04:07:39announced2024-10-22: Updated project metadata.
Publication List
Perez-Perri JI, Rogell B, Schwarzl T, Stein F, Zhou Y, Rettel M, Brosig A, Hentze MW, Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome capture. Nat Commun, 9(1):4408(2018) [pubmed]
10.1038/s41467-018-06557-8;
Keyword List
curator keyword: Biomedical
submitter keyword: RIC, eRIC,RNA interactome, RBPs, RBPome, RNA-binding proteins
Contact List
Matthias W. Hentze
contact affiliationEuropean Molecular Biology Laboratory, Meyerhofstrasse 1, 69117 Heidelberg, Germany.
contact emailhentze@embl.de
lab head
Frank Stein
contact affiliationEMBL
contact emailfrank.stein@embl.de
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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