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PXD010759

DataSet Summary

  • HostingRepository: PRIDE
  • AnnounceDate: 2019-03-14
  • AnnouncementXML: Submission_2019-03-14_04:38:56.xml
  • DigitalObjectIdentifier:
  • ReviewLevel: Peer-reviewed dataset
  • DatasetOrigin: Original data
  • RepositorySupport: Unsupported dataset by repository
  • PrimarySubmitter: Benjamin Parker
  • Title: Proteomic analysis of Psmd9 knockdown in the liver
  • Description: We have shown that decreasing psmd9 expression effects lipid metabolism in vivo and were interested in investigating the pathways by which psmd9 elicited these changes. To investigate these mechanisms, we performed proteomic analyses on the livers from C57 and DBA mice that had been treated with antisense oligonucleotides targeted to psmd9.
  • SpeciesList: scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
  • ModificationList: monohydroxylated residue; iodoacetamide derivatized residue
  • Instrument: Q Exactive HF

Dataset History

VersionDatetimeStatusChangeLog Entry
02018-08-13 06:50:00ID requested
12019-03-14 04:38:57announced

Publication List

  1. Parker BL, Calkin AC, Seldin MM, Keating MF, Tarling EJ, Yang P, Moody SC, Liu Y, Zerenturk EJ, Needham EJ, Miller ML, Clifford BL, Morand P, Watt MJ, Meex RCR, Peng KY, Lee R, Jayawardana K, Pan C, Mellett NA, Weir JM, Lazarus R, Lusis AJ, Meikle PJ, James DE, de Aguiar Vallim TQ, Drew BG, An integrative systems genetic analysis of mammalian lipid metabolism. Nature, 567(7747):187-193(2019) [pubmed]

Keyword List

  1. ProteomeXchange project tag: Liver (B/D-HPP)
  2. curator keyword: Biological
  3. submitter keyword: liver, proteomics, PSMD9

Contact List

    Benjamin Parker
    • contact affiliation: The University of Sydney
    • contact email: benjamin.parker@sydney.edu.au
    • lab head:
    Benjamin Parker
    • contact affiliation: The University of Sydney
    • contact email: benjamin.parker@sydney.edu.au
    • dataset submitter:

Full Dataset Link List

  1. Dataset FTP location
  2. PRIDE project URI
Repository Record List
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