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PXD010728

PXD010728 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleConjoint analysis of transcriptional and protein changes in heterosis of hybrid yellow catfish Huangyou-1 uncovers key roles for miRNAs
DescriptionHeterosis is a complex biological phenomenon in which hybridization exhibit superior phenotypic characteristics. The underlying molecular basis for heterosis, particularly for fishes, remains elusive. In this study, we used next-generation sequencing technologies and tandem mass tags to characterise mRNA-seq, miRNA-seq and proteomic of Pelteobagrus fulvidraco, P. vachelli and hybrid yellow catfish Huangyou-1 (P. fulvidraco ♀×P. vachelli ♂) livers and in doing so, offer deeper insight into the transcriptional and protein changes in heterosis uncovers key roles for miRNAs.
HostingRepositoryiProX
AnnounceDate2019-05-15
AnnouncementXMLSubmission_2023-03-01_20:50:53.969.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterShaowu Yin
SpeciesList scientific name: Tachysurus vachellii; NCBI TaxID: 175792; scientific name: Tachysurus fulvidraco x Tachysurus vachelli; NCBI TaxID: 1610892; scientific name: Tachysurus fulvidraco; NCBI TaxID: 1234273;
ModificationListNo PTMs are included in the dataset
InstrumentThermo Scientific instrument model
Dataset History
RevisionDatetimeStatusChangeLog Entry
02018-08-08 19:09:17ID requested
12018-08-08 19:10:03announced
22019-04-25 22:49:08announcedUpdate data files.
32019-05-14 19:22:02announcedUpdate data files.
42023-03-01 20:50:58announced2019-04-26: Update data files.
2019-05-15: upload new datafiles
2023-03-02: Update publication information.
Publication List
Zhang G, Li J, Zhang J, Liang X, Zhang X, Wang T, Yin S, Integrated Analysis of Transcriptomic, miRNA and Proteomic Changes of a Novel Hybrid Yellow Catfish Uncovers Key Roles for miRNAs in Heterosis. Mol Cell Proteomics, 18(7):1437-1453(2019) [pubmed]
Keyword List
submitter keyword: heterosis, transcriptome, proteome, miRNAome, miRNA-mRNA-protein, hybrid catfish
Contact List
Shaowu Yin
contact affiliationNanjing normal university
contact emailyinshaowu@163.com
lab head
Shaowu Yin
contact affiliationNanjing normal university
contact emailyinshaowu@163.com
dataset submitter
Full Dataset Link List
iProX dataset URI