PXD010728
PXD010728 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | Conjoint analysis of transcriptional and protein changes in heterosis of hybrid yellow catfish Huangyou-1 uncovers key roles for miRNAs |
Description | Heterosis is a complex biological phenomenon in which hybridization exhibit superior phenotypic characteristics. The underlying molecular basis for heterosis, particularly for fishes, remains elusive. In this study, we used next-generation sequencing technologies and tandem mass tags to characterise mRNA-seq, miRNA-seq and proteomic of Pelteobagrus fulvidraco, P. vachelli and hybrid yellow catfish Huangyou-1 (P. fulvidraco ♀×P. vachelli ♂) livers and in doing so, offer deeper insight into the transcriptional and protein changes in heterosis uncovers key roles for miRNAs. |
HostingRepository | iProX |
AnnounceDate | 2019-05-15 |
AnnouncementXML | Submission_2023-03-01_20:50:53.969.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Shaowu Yin |
SpeciesList | scientific name: Tachysurus vachellii; NCBI TaxID: 175792; scientific name: Tachysurus fulvidraco x Tachysurus vachelli; NCBI TaxID: 1610892; scientific name: Tachysurus fulvidraco; NCBI TaxID: 1234273; |
ModificationList | No PTMs are included in the dataset |
Instrument | Thermo Scientific instrument model |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2018-08-08 19:09:17 | ID requested | |
1 | 2018-08-08 19:10:03 | announced | |
2 | 2019-04-25 22:49:08 | announced | Update data files. |
3 | 2019-05-14 19:22:02 | announced | Update data files. |
⏵ 4 | 2023-03-01 20:50:58 | announced | 2019-04-26: Update data files. 2019-05-15: upload new datafiles 2023-03-02: Update publication information. |
Publication List
Zhang G, Li J, Zhang J, Liang X, Zhang X, Wang T, Yin S, Integrated Analysis of Transcriptomic, miRNA and Proteomic Changes of a Novel Hybrid Yellow Catfish Uncovers Key Roles for miRNAs in Heterosis. Mol Cell Proteomics, 18(7):1437-1453(2019) [pubmed] |
Keyword List
submitter keyword: heterosis, transcriptome, proteome, miRNAome, miRNA-mRNA-protein, hybrid catfish |
Contact List
Shaowu Yin | |
---|---|
contact affiliation | Nanjing normal university |
contact email | yinshaowu@163.com |
lab head | |
Shaowu Yin | |
contact affiliation | Nanjing normal university |
contact email | yinshaowu@163.com |
dataset submitter |
Full Dataset Link List
iProX dataset URI |