PXD010720

PXD010720 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Characterization of extracellular enzymes involved in natural decomposition of conifer wood
Description	The conifer needle endophyte, Phialocephala scopiformis, was cultivated in media containing ground Pinus contorta wood as sole carbon source. After five and seven days growth, concentrated extracellular fluids were subjected to LC-MS/MS analyses.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:50:52.302.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Greg Sabat
SpeciesList	scientific name: Phialocephala scopiformis; NCBI TaxID: 149040;
ModificationList	iodoacetamide derivatized glutamic acid; deamidated residue
Instrument	LTQ Orbitrap Elite

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-08-08 04:11:15	ID requested
1	2018-09-18 06:47:15	announced
2	2019-02-18 01:17:48	announced	Updated publication reference for PubMed record(s): 30746512.
⏵ 3	2024-10-22 04:51:00	announced	2024-10-22: Updated project metadata.

Publication List

Bhatnagar JM, Sabat G, Cullen D, DAOMC 229536 Proteome When Grown on Wood Used as the Sole Carbon Source. Microbiol Resour Announc, 8(6):(2019) [pubmed]
10.1128/mra.01280-18;

Bhatnagar JM, Sabat G, Cullen D, DAOMC 229536 Proteome When Grown on Wood Used as the Sole Carbon Source. Microbiol Resour Announc, 8(6):(2019) [pubmed]

10.1128/mra.01280-18;

Keyword List

submitter keyword: wood decomposition,Phialocephala scopiformis, Pinus contorta, extracellula, LC-MS/MS

submitter keyword: wood decomposition,Phialocephala scopiformis, Pinus contorta, extracellula, LC-MS/MS

Contact List

Dr. Daniel Cullen
contact affiliation	Institute for Microbial and Biochemical Sciences, Forest Products Laboratory, USDA
contact email	daniel.cullen@wisc.edu
lab head
Greg Sabat
contact affiliation	University of Wisconsin
contact email	gsabat@wisc.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/11/PXD010720
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/11/PXD010720

PRIDE project URI

Repository Record List

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