PXD010702
PXD010702 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | A Time-resolved Multi-omic Atlas of the Developing Mouse Stomach |
Description | We collected 3 replicates of whole stomach organs at 15 time points that covered embryonic days (E12.5, E13.5, E14.5, E15.5, E16.5, E17.5, E18.5), postnatal days (D1, D3, D5), and postnatal weeks (W1, W2, W3, W6, W8). The sampling time window covered from the earliest day that stomach sampling is anatomically feasible to the latest weeks when stomachs are close to mature. We applied a fast-seq proteomics workflow, a label-free quantitative proteomics approach in combination with small scale reverse phase pre-fractionation strategy. |
HostingRepository | iProX |
AnnounceDate | 2018-08-06 |
AnnouncementXML | Submission_2019-08-14_23:33:30.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Xianju Li |
SpeciesList | scientific name: Mus musculus; NCBI TaxID: 10090; |
ModificationList | monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2018-08-06 07:17:51 | ID requested | |
1 | 2018-08-06 07:33:03 | announced | |
⏵ 2 | 2019-08-14 23:42:44 | announced | update publication information. |
Publication List
Li X, Zhang C, Gong T, Ni X, Li J, Zhan D, Liu M, Song L, Ding C, Xu J, Zhen B, Wang Y, Qin J, A time-resolved multi-omic atlas of the developing mouse stomach. Nat Commun, 9(1):4910(2018) [pubmed] |
Keyword List
submitter keyword: mouse, stomach development, proteome, transcriptome, isoform, splice-junction, gastric cancer |
Contact List
Jun Qin | |
---|---|
contact affiliation | State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences (The PHOENIX Center, Beijing) |
contact email | jqin@bcm.edu |
lab head | |
Xianju Li | |
contact affiliation | State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences (The PHOENIX Center, Beijing) |
contact email | xianju_li@163.com |
dataset submitter |
Full Dataset Link List
iProX dataset URI |