PXD010692 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Proteomic analysis of plasmodesmata from Populus cell suspension cultures |
Description | In this project, we have investigated the proteome of the plasmodesmata (PD) enriched membrane fraction from poplar cell suspension cultures and quantitatively compared its protein composition with other membrane fractions. We build on the previously published literature on the PD proteome by using semiquantitative methods and, for the first time, demonstrate in vitro callose synthase activity from Populus PD proteins. To our knowledge, this study is the first proteomic investigation of the PD performed on a tree species. |
HostingRepository | PRIDE |
AnnounceDate | 2018-12-31 |
AnnouncementXML | Submission_2018-12-31_03:29:00.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Vaibhav Srivastava |
SpeciesList | scientific name: Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa); NCBI TaxID: 3694; |
ModificationList | Ethanolyl |
Instrument | Q-Tof ultima |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2018-08-06 04:00:54 | ID requested | |
⏵ 1 | 2018-12-31 03:29:02 | announced | |
Publication List
Leijon F, Melzer M, Zhou Q, Srivastava V, Bulone V, Cell Suspension Cultures in Relation With Callose Biosynthesis. Front Plant Sci, 9():1681(2018) [pubmed] |
Keyword List
curator keyword: Biological |
submitter keyword: Populus, plasmodesmata, callose synthase, callose, mass spectrometry, spectral counting |
Contact List
Vaibhav Srivastava |
contact affiliation | Division of Glycoscience, School of Engineering Sciences in Chemistry, Biotechnology and Health, Royal Institute of Technology (KTH), AlbaNova University Centre, Stockholm, Sweden |
contact email | vasri@kth.se |
lab head | |
Vaibhav Srivastava |
contact affiliation | Biotechnology |
contact email | vasri@kth.se |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/12/PXD010692 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD010692
- Label: PRIDE project
- Name: Proteomic analysis of plasmodesmata from Populus cell suspension cultures