PXD010641

PXD010641 is an original dataset announced via ProteomeXchange.

Title	Anoxygenic Photosynthesis and Dark Carbon Metabolism in the Purple Sulfur Bacterium “Thiodictyon syntrophicum“ nov. strain Cad16T
Description	Strain Cad16T was previously shown to fix a major fraction of the bulk CO2 under both light and dark conditions and was suggested to be involved in Fe(II) driven aerobic metabolism in the lake Cadagno chemocline. However evidence on genomic and proteomic level was only fragmentary . In order to understand the biological functions expressed under phototrophic and chemotrophic growth conditions of str. Cad16T an in situ experiment conceived. It included cultures of str. Cad16T incubated in dialysis bags for three months while physiochemical conditions were monitored longitudinally. Upon sampling, physiological differences of str. Cad16T were compared utilizing quantitative proteomics in combination with CO2-uptake measurements.
HostingRepository	PRIDE
AnnounceDate	2019-03-29
AnnouncementXML	Submission_2019-03-29_06:45:23.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD010641
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Samuel Luedin
SpeciesList	scientific name: Candidatus Thiodictyon syntrophicum str. Cad16; NCBI TaxID: 572262;
ModificationList	Deamidated; Oxidation; Acetyl
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2018-08-01 00:42:09	ID requested
⏵ 1	2019-03-29 06:45:24	announced

Luedin SM, Storelli N, Danza F, Roman S, Wittwer M, Pothier JF, Tonolla M, ". Front Microbiol, 10():384(2019) [pubmed]

curator keyword: Biological

submitter keyword: LFQ-LC-MS/MS, quantitative proteomics, purple sulfur bacteria, Lake Cadagno, carbon fixation, in situ, environmental microbiology

Mauro Tonolla
contact affiliation	Laboratory of Applied Microbiology (LMA), Department for Environmental Constructions and Design (DACD), University of Applied Sciences and Arts of Southern Switzerland (SUPSI), via Mirasole 22a, Bellinzona, Switzerland
contact email	mauro.tonolla@supsi.ch
lab head
Samuel Luedin
contact affiliation	University of Geneva
contact email	samuel.ludin@etu.unige.ch
dataset submitter

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PRIDE project URI

• PRIDE
  1. PXD010641
     1. Label: PRIDE project
     2. Name: Anoxygenic Photosynthesis and Dark Carbon Metabolism in the Purple Sulfur Bacterium “Thiodictyon syntrophicum“ nov. strain Cad16T