PXD010623

PXD010623 is an original dataset announced via ProteomeXchange.

Title	Protemic analysis of the effect of c-di-GMP and c-di-AMP on the protein expression of Mycobacterium smegmatis
Description	c-di-GMP and c-di-AMP are important conserved second messenger in bacteria, they play a critical role in a wide range of cellular processes, such as motility, virulence, biofilm formation, cell-cycle progression and cell development, but there are only two c-di-GMP receptors and one c-di-AMP receptors were identified in mycobacteria so far, to identify more c-di-GMP and c-di-AMP receptors we compare the protein expression level of c-di-GMP or c-di-AMP synthesis enzyme overexpression strain with the wild type Mycobacterium smegmatis.
HostingRepository	PRIDE
AnnounceDate	2019-07-03
AnnouncementXML	Submission_2019-07-12_03:01:48.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Qingbin Hu
SpeciesList	scientific name: Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155); NCBI TaxID: 246196;
ModificationList	iTRAQ8plex-116 reporter+balance reagent acylated residue
Instrument	TripleTOF 5600

Revision	Datetime	Status	ChangeLog Entry
0	2018-07-31 01:50:11	ID requested
1	2019-07-03 00:17:14	announced
⏵ 2	2019-07-12 03:01:50	announced	Updated publication reference for PubMed record(s): 31270210.

Hu Q, Zhang J, Chen Y, Hu L, Li W, He ZG, in response to oxidative stress. J Biol Chem, 294(34):12729-12742(2019) [pubmed]

curator keyword: Biological

submitter keyword: Mycobacterium smegmatis, c-di-GMP, c-di-AMP, iTTAQ

Zheng-Guo He
contact affiliation	National Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China
contact email	hezhengguo@mail.hzau.edu.cn
lab head
Qingbin Hu
contact affiliation	National Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China
contact email	qingbinhu0220@163.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/07/PXD010623

PRIDE project URI

• PRIDE
  1. PXD010623
     1. Label: PRIDE project
     2. Name: Protemic analysis of the effect of c-di-GMP and c-di-AMP on the protein expression of Mycobacterium smegmatis