PXD010546

PXD010546 is an original dataset announced via ProteomeXchange.

Title	Expression of proteins by a marine Brevibacterium casei strain in response to elevated levels of Cadmium
Description	A marine bacterial isolate, Brevibacterium casei was grown in LB broth in presence of 50ppm Cadmium (provided in the form cadmium chloride, with final concentration of Cadmium at 50ppm). The cells were harvested at different time intervals and proteins extracted from these using indigenous protocol developed in laboratory. Similarly, the strain was grown in absence of Cadmium and same steps were followed, which was treated as control. The proteins extracted from test as well control set were digested using trypsin following standard protocol. Trypsin digests were injected in LCMS QToF for obtaining spectral library which was used to identify the proteins against NCBI database
HostingRepository	PRIDE
AnnounceDate	2026-07-31
AnnouncementXML	Submission_2026-07-31_08:29:34.006.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Samir Damare
SpeciesList	scientific name: Brevibacterium casei; NCBI TaxID: NEWT:33889;
ModificationList	iodoacetamide derivatized residue
Instrument	6538 Q-TOF LC/MS

Revision	Datetime	Status	ChangeLog Entry
0	2018-07-24 07:54:01	ID requested
⏵ 1	2026-07-31 08:29:34	announced

10.1007/S42770-020-00353-7;

curator keyword: Biological

submitter keyword: In solution digestion, LCMS-QToF, Cadmium, Bacteria,Heavy metal

Dr Samir R Damare
contact affiliation	CSIR-National Institute of Oceanography, Biological Oceanography Division
contact email	samir@nio.org
lab head
Samir Damare
contact affiliation	CSIR-National Institute of Oceanography
contact email	samir@nio.org
dataset submitter

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PRIDE project URI

• PRIDE
  1. PXD010546
     1. Label: PRIDE project
     2. Name: Expression of proteins by a marine Brevibacterium casei strain in response to elevated levels of Cadmium