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PXD010355

PXD010355 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleAn atypical aspartic protease modulates lateral root development in Arabidopsis thaliana
DescriptionWe determined the specificity profile of recombinant ASPR1 (Atypical Aspartic Protease in Roots 1) using proteome-derived libraries. Although rASPR1 preferred hydrophobic amino acids in the S1 subsite, which is in line with what was previously described for other APs, rASPR1 also displayed a clear preference for accommodating asparagine and lysine in S1, a characteristic only reported so far for fungal APs. Both primary and secondary specificity preferences of rASPR1 thus revealed unique specificity requirements similar to fungal APs that are unprecedented for plant APs.
HostingRepositoryPRIDE
AnnounceDate2024-10-22
AnnouncementXMLSubmission_2024-10-22_05:01:08.888.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterSandra Anjo
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListthioacylation of primary amines - site N-term; biotinylated residue; thioacylation of primary amines - site K; dimethylated residue; iodoacetamide derivatized residue
InstrumentTripleTOF 5600
Dataset History
RevisionDatetimeStatusChangeLog Entry
02018-07-10 02:22:47ID requested
12020-03-19 08:18:31announced
22024-10-22 05:01:10announced2024-10-22: Updated project metadata.
Publication List
Soares A, Niedermaier S, Faro R, Loos A, Manadas B, Faro C, Huesgen PF, Cheung AY, Sim, õ, es I, An atypical aspartic protease modulates lateral root development in Arabidopsis thaliana. J Exp Bot, 70(7):2157-2171(2019) [pubmed]
10.1093/jxb/erz059;
Keyword List
submitter keyword: Arabidopsis thaliana
ASPR1
Atypical aspartic protease
auxin
lateral root
magnICON expression system
root development
ROS
Contact List
Isaura Simões
contact affiliationCNC-Center for Neuroscience and Cell Biology, University of Coimbra, 3004-517 Coimbra, Portugal; Biocant, Biotechnology Innovation Center, 3060-197 Cantanhede, Portugal
contact emailisimoes@biocant.pt
lab head
Sandra Anjo
contact affiliation​Center for Neuroscience and Cell Biology – University of Coimbra
contact emailsandra.isabel.anjo@gmail.com
dataset submitter
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Dataset FTP location
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PRIDE project URI
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