PXD010355 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | An atypical aspartic protease modulates lateral root development in Arabidopsis thaliana |
Description | We determined the specificity profile of recombinant ASPR1 (Atypical Aspartic Protease in Roots 1) using proteome-derived libraries. Although rASPR1 preferred hydrophobic amino acids in the S1 subsite, which is in line with what was previously described for other APs, rASPR1 also displayed a clear preference for accommodating asparagine and lysine in S1, a characteristic only reported so far for fungal APs. Both primary and secondary specificity preferences of rASPR1 thus revealed unique specificity requirements similar to fungal APs that are unprecedented for plant APs. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_05:01:08.888.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Sandra Anjo |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | thioacylation of primary amines - site N-term; biotinylated residue; thioacylation of primary amines - site K; dimethylated residue; iodoacetamide derivatized residue |
Instrument | TripleTOF 5600 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2018-07-10 02:22:47 | ID requested | |
1 | 2020-03-19 08:18:31 | announced | |
⏵ 2 | 2024-10-22 05:01:10 | announced | 2024-10-22: Updated project metadata. |
Publication List
Soares A, Niedermaier S, Faro R, Loos A, Manadas B, Faro C, Huesgen PF, Cheung AY, Sim, õ, es I, An atypical aspartic protease modulates lateral root development in Arabidopsis thaliana. J Exp Bot, 70(7):2157-2171(2019) [pubmed] |
10.1093/jxb/erz059; |
Keyword List
submitter keyword: Arabidopsis thaliana |
ASPR1 |
Atypical aspartic protease |
auxin |
lateral root |
magnICON expression system |
root development |
ROS |
Contact List
Isaura Simões |
contact affiliation | CNC-Center for Neuroscience and Cell Biology, University of Coimbra, 3004-517 Coimbra, Portugal; Biocant, Biotechnology Innovation Center, 3060-197 Cantanhede, Portugal |
contact email | isimoes@biocant.pt |
lab head | |
Sandra Anjo |
contact affiliation | Center for Neuroscience and Cell Biology – University of Coimbra |
contact email | sandra.isabel.anjo@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/03/PXD010355 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD010355
- Label: PRIDE project
- Name: An atypical aspartic protease modulates lateral root development in Arabidopsis thaliana