PXD010355

PXD010355 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	An atypical aspartic protease modulates lateral root development in Arabidopsis thaliana
Description	We determined the specificity profile of recombinant ASPR1 (Atypical Aspartic Protease in Roots 1) using proteome-derived libraries. Although rASPR1 preferred hydrophobic amino acids in the S1 subsite, which is in line with what was previously described for other APs, rASPR1 also displayed a clear preference for accommodating asparagine and lysine in S1, a characteristic only reported so far for fungal APs. Both primary and secondary specificity preferences of rASPR1 thus revealed unique specificity requirements similar to fungal APs that are unprecedented for plant APs.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:01:08.888.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sandra Anjo
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	thioacylation of primary amines - site N-term; biotinylated residue; thioacylation of primary amines - site K; dimethylated residue; iodoacetamide derivatized residue
Instrument	TripleTOF 5600

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-07-10 02:22:47	ID requested
1	2020-03-19 08:18:31	announced
⏵ 2	2024-10-22 05:01:10	announced	2024-10-22: Updated project metadata.

Publication List

Soares A, Niedermaier S, Faro R, Loos A, Manadas B, Faro C, Huesgen PF, Cheung AY, Sim, õ, es I, An atypical aspartic protease modulates lateral root development in Arabidopsis thaliana. J Exp Bot, 70(7):2157-2171(2019) [pubmed]
10.1093/jxb/erz059;

Soares A, Niedermaier S, Faro R, Loos A, Manadas B, Faro C, Huesgen PF, Cheung AY, Sim, õ, es I, An atypical aspartic protease modulates lateral root development in Arabidopsis thaliana. J Exp Bot, 70(7):2157-2171(2019) [pubmed]

10.1093/jxb/erz059;

Keyword List

submitter keyword: Arabidopsis thaliana
ASPR1
Atypical aspartic protease
auxin
lateral root
magnICON expression system
root development
ROS

submitter keyword: Arabidopsis thaliana

ASPR1

Atypical aspartic protease

auxin

lateral root

magnICON expression system

root development

ROS

Contact List

Isaura Simões
contact affiliation	CNC-Center for Neuroscience and Cell Biology, University of Coimbra, 3004-517 Coimbra, Portugal; Biocant, Biotechnology Innovation Center, 3060-197 Cantanhede, Portugal
contact email	isimoes@biocant.pt
lab head
Sandra Anjo
contact affiliation	Center for Neuroscience and Cell Biology – University of Coimbra
contact email	sandra.isabel.anjo@gmail.com
dataset submitter

Full Dataset Link List

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PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/03/PXD010355

PRIDE project URI

Repository Record List

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