PXD010294

PXD010294 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomic landscape of cholangiocarcinomas reveals 3 different subgroups according to their localization and the underlying non-tumor liver
Description	Cholangiocarcinomas (CC) define a heterogeneous entity based upon their anatomic localization along the biliary tree and, for those developing in the liver (iCC), depending on the aspect of non tumoral liver (cirrhosis or not). Gene expression analysis of iCC revealed 2 main subgroups (inflammatory and proliferative). The aim of the study was to address the heterogeneity of CC by comparing their protein expression using a global quantitative proteomic approach.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:46:12.203.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Thibaut LEGER
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	phosphorylated residue; monohydroxylated residue; acetylated residue
Instrument	Orbitrap Fusion ETD

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-07-03 05:27:48	ID requested
1	2018-12-11 02:36:21	announced
⏵ 2	2024-10-22 04:46:13	announced	2024-10-22: Updated project metadata.

Publication List

10.1002/prca.201800128;
Le Faouder J, Gigante E, L, é, ger T, Albuquerque M, Beaufr, è, re A, Soubrane O, Dokmak S, Camadro JM, Cros J, Paradis V, Proteomic Landscape of Cholangiocarcinomas Reveals Three Different Subgroups According to Their Localization and the Aspect of Non-Tumor Liver. Proteomics Clin Appl, 13(1):e1800128(2019) [pubmed]

10.1002/prca.201800128;

Le Faouder J, Gigante E, L, é, ger T, Albuquerque M, Beaufr, è, re A, Soubrane O, Dokmak S, Camadro JM, Cros J, Paradis V, Proteomic Landscape of Cholangiocarcinomas Reveals Three Different Subgroups According to Their Localization and the Aspect of Non-Tumor Liver. Proteomics Clin Appl, 13(1):e1800128(2019) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: quantitative proteomics,cholangiocarcinoma

curator keyword: Biological

submitter keyword: quantitative proteomics,cholangiocarcinoma

Contact List

Valérie Paradis
contact affiliation	Pathology Department, Beaujon Hospital, Assistance Publique-Hôpitaux de Paris, Clichy, France
contact email	valerieprds@gmail.com
lab head
Thibaut LEGER
contact affiliation	EHESP/LERES
contact email	thibaut.leger@ehesp.fr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/12/PXD010294
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/12/PXD010294

PRIDE project URI

Repository Record List

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