PXD010239

PXD010239 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Identification of proteins in the Salmonella SPI-1 type III secretion injectisome needle complex
Description	We determined the cryo-EM structure of the type III secretion injectisome needle complex. We used LC-MS/MS to idensitfy the constituent proteins showing the predominant presence of the major inner- and outer basal body proteins (PrgH+PrgK and InvG respectively), export apparatus protein SpaP and SpaR, and the rod and needle filament proteins PrgJ and PrgI.
HostingRepository	PRIDE
AnnounceDate	2018-10-16
AnnouncementXML	Submission_2018-10-16_08:57:38.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Liam Worrall
SpeciesList	scientific name: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720); NCBI TaxID: 99287;
ModificationList	No PTMs are included in the dataset
Instrument	impact II

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-06-27 02:54:16	ID requested
⏵ 1	2018-10-16 08:57:40	announced

Publication List

Hu J, Worrall LJ, Hong C, Vuckovic M, Atkinson CE, Caveney N, Yu Z, Strynadka NCJ, Cryo-EM analysis of the T3S injectisome reveals the structure of the needle and open secretin. Nat Commun, 9(1):3840(2018) [pubmed]

Hu J, Worrall LJ, Hong C, Vuckovic M, Atkinson CE, Caveney N, Yu Z, Strynadka NCJ, Cryo-EM analysis of the T3S injectisome reveals the structure of the needle and open secretin. Nat Commun, 9(1):3840(2018) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: bacteria, type iii secretion system, injectisome

curator keyword: Biological

submitter keyword: bacteria, type iii secretion system, injectisome

Contact List

Natalie Strynadka
contact affiliation	Department of Biochemistry, The University of British Columbia, Vancouver, Canada
contact email	ncjs@mail.ubc.ca
lab head
Liam Worrall
contact affiliation	The University of British Columbia
contact email	liam@byron.biochem.ubc.ca
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD010239
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD010239

PRIDE project URI

Repository Record List

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