PXD010239 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Identification of proteins in the Salmonella SPI-1 type III secretion injectisome needle complex |
Description | We determined the cryo-EM structure of the type III secretion injectisome needle complex. We used LC-MS/MS to idensitfy the constituent proteins showing the predominant presence of the major inner- and outer basal body proteins (PrgH+PrgK and InvG respectively), export apparatus protein SpaP and SpaR, and the rod and needle filament proteins PrgJ and PrgI. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:46:15.422.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Liam Worrall |
SpeciesList | scientific name: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720); NCBI TaxID: 99287; |
ModificationList | No PTMs are included in the dataset |
Instrument | impact II |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2018-06-27 02:54:16 | ID requested | |
1 | 2018-10-16 08:57:40 | announced | |
⏵ 2 | 2024-10-22 04:46:16 | announced | 2024-10-22: Updated project metadata. |
Publication List
Hu J, Worrall LJ, Hong C, Vuckovic M, Atkinson CE, Caveney N, Yu Z, Strynadka NCJ, Cryo-EM analysis of the T3S injectisome reveals the structure of the needle and open secretin. Nat Commun, 9(1):3840(2018) [pubmed] |
10.1038/s41467-018-06298-8; |
Keyword List
curator keyword: Biological |
submitter keyword: bacteria, type iii secretion system, injectisome |
Contact List
Natalie Strynadka |
contact affiliation | Department of Biochemistry, The University of British Columbia, Vancouver, Canada |
contact email | ncjs@mail.ubc.ca |
lab head | |
Liam Worrall |
contact affiliation | The University of British Columbia |
contact email | liam@byron.biochem.ubc.ca |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD010239 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD010239
- Label: PRIDE project
- Name: Identification of proteins in the Salmonella SPI-1 type III secretion injectisome needle complex