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DataSet Summary

  • HostingRepository: PRIDE
  • AnnounceDate: 2019-03-15
  • AnnouncementXML: Submission_2019-04-03_07:27:48.xml
  • DigitalObjectIdentifier:
  • ReviewLevel: Peer-reviewed dataset
  • DatasetOrigin: Original data
  • RepositorySupport: Unsupported dataset by repository
  • PrimarySubmitter: Sergey Shabelnikov
  • Title: Proteome profiling of cell-free coelomic fluid from the common starfish Asterias rubens
  • Description: Echinoderms, possessing outstanding regenerative capability, provide unique model system for the study of the response to injury. However, there is little known about the proteomic composition of coelomic fluid, an important biofluid circulating through the whole body and reflecting an overall biological status of the organism. In this study, we used LC-MALDI tandem mass spectrometry to characterize proteome of cell-free coelomic fluid of starfish Asterias rubens and follow the changes occurring in response to puncture wound and blood loss. Our study demonstrated significant changes of CF proteome during the first hours after injury and presented a series of candidate proteins involved in early response to injury, providing interesting targets for future functional studies.
  • SpeciesList: scientific name: Asterias rubens; NCBI TaxID: 7604;
  • ModificationList: iodoacetamide derivatized residue
  • Instrument: TOF/TOF 5800

Dataset History

VersionDatetimeStatusChangeLog Entry
02018-06-26 05:40:08ID requested
12019-03-15 00:35:05announced
22019-04-03 07:27:49announcedUpdated publication reference for PubMed record(s): 30877231.

Publication List

  1. Shabelnikov SV, Bobkov DE, Sharlaimova NS, Petukhova OA, . J Exp Biol, 222(Pt 6):(2019) [pubmed]

Keyword List

  1. curator keyword: Biological
  2. submitter keyword: Echinoderms, biofluid, injury response, wound healing, regeneration, protein domain, orphan, peptidase inhibitor, LC-MALDI

Contact List

    Sergey Shabelnikov
    • contact affiliation: Department of intracellular signalling and transport, Institute of Cytology, Russian Academy of Sciences, St. Petersburg, Russia
    • contact email: sergey.v.shabelnikov@gmail.com
    • lab head:
    Sergey Shabelnikov
    • contact affiliation: Institute if Cytology of RAS
    • contact email: sergey.v.shabelnikov@gmail.com
    • dataset submitter:

Full Dataset Link List

  1. Dataset FTP location
  2. PRIDE project URI
Repository Record List

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