PXD010228

PXD010228 is an original dataset announced via ProteomeXchange.

Title	Proteome profiling of cell-free coelomic fluid from the common starfish Asterias rubens
Description	Echinoderms, possessing outstanding regenerative capability, provide unique model system for the study of the response to injury. However, there is little known about the proteomic composition of coelomic fluid, an important biofluid circulating through the whole body and reflecting an overall biological status of the organism. In this study, we used LC-MALDI tandem mass spectrometry to characterize proteome of cell-free coelomic fluid of starfish Asterias rubens and follow the changes occurring in response to puncture wound and blood loss. Our study demonstrated significant changes of CF proteome during the first hours after injury and presented a series of candidate proteins involved in early response to injury, providing interesting targets for future functional studies.
HostingRepository	PRIDE
AnnounceDate	2019-03-15
AnnouncementXML	Submission_2019-04-03_07:27:48.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sergey Shabelnikov
SpeciesList	scientific name: Asterias rubens; NCBI TaxID: 7604;
ModificationList	iodoacetamide derivatized residue
Instrument	TOF/TOF 5800

Revision	Datetime	Status	ChangeLog Entry
0	2018-06-26 05:40:08	ID requested
1	2019-03-15 00:35:05	announced
⏵ 2	2019-04-03 07:27:49	announced	Updated publication reference for PubMed record(s): 30877231.

Shabelnikov SV, Bobkov DE, Sharlaimova NS, Petukhova OA, . J Exp Biol, 222(Pt 6):(2019) [pubmed]

curator keyword: Biological

submitter keyword: Echinoderms, biofluid, injury response, wound healing, regeneration, protein domain, orphan, peptidase inhibitor, LC-MALDI

Sergey Shabelnikov
contact affiliation	Department of intracellular signalling and transport, Institute of Cytology, Russian Academy of Sciences, St. Petersburg, Russia
contact email	sergey.v.shabelnikov@gmail.com
lab head
Sergey Shabelnikov
contact affiliation	Institute if Cytology of RAS
contact email	sergey.v.shabelnikov@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/03/PXD010228

PRIDE project URI

• PRIDE
  1. PXD010228
     1. Label: PRIDE project
     2. Name: Proteome profiling of cell-free coelomic fluid from the common starfish Asterias rubens